Salmonella enterica subsp. enterica serovar Worthington OLF-FSR1_WB_Quail_SW-70 |
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Putative Salmonella enterica subsp. enterica serovar Worthington OLF-FSR1_WB_Quail_SW-70 RM systems
Ref: Naushad,S. et al. unpublished
REBASE ref # 30679
| Sequence length: | GenBank #: | |
| Chromosome: | 4,759,747 bp | CP051270 |
| plasmid pSW37-267106: | 267,356 bp | CP051271 |
REBASE acronym: SenSW70
Org_num: 41158
All begin G4F94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19415 | restriction endonuclease | |||
| 19420 | R | Sen9941IIIP (100% identity) | CNGANNNNNNNNTGCG | SenSW70ORF19425P |
| 19425 | M | M.Sen9941III (100% identity) | CNGANNNNNNNNTGCG | M.SenSW70ORF19425P |
| 19430 | S | S.Sen9941III (100% identity) | CNGANNNNNNNNTGCG | S.SenSW70ORF19425P |
| 19435 | endoribonuclease SymE | |||
| 19640 | DUF945 domain-containing protein | |||
| 19645 | R | Sen7830ORF6325P (100% identity) | TTANNNNNNNTGGG | SenSW70ORF19650P |
| 19650 | M | M.Sen9941II (100% identity) | TTANNNNNNNTGGG | M.SenSW70ORF19650P |
| 19655 | S | S.Sen9941II (100% identity) | TTANNNNNNNTGGG | S.SenSW70ORF19650P |
| 19660 | 355 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1765 | cell division protein DamX | |||
| 1770 | M | M.Sen9941DamP (100% identity) | GATC | M.SenSW70DamP |
| 1775 | ribulose-phosphate 3-epimerase | |||
| 2255 | DUF2556 family protein | |||
| 2260 | M | M.Sen9941ORF458P (100% identity) | ATGCAT | M.SenSW70ORF2260P |
| 2265 | DNA-binding transcriptional regulator Fis | |||
| 5825 | DUF4060 family protein | |||
| 5830 | M | M.SenSW37ORF5710P (100% identity) | M.SenSW70ORF5830P | |
| 5835 | YqaJ viral recombinase family protein | |||
| 5915 | ead/Ea22-like family protein | |||
| 5920 | M | M.Sen7830ORF22185P (100% identity) | M.SenSW70ORF5920P | |
| 5925 | DUF550 domain-containing protein | |||
| 9185 | phosphohydrolase | |||
| 9190 | M | M.Sen7830DcmP (100% identity) | CCWGG | M.SenSW70Dcm2P |
| 9195 | V | V.StyUK1DcmP (100% identity) | V.SenSW70Dcm2P | |
| 9200 | drug/metabolite exporter YedA | |||
| 13265 | LexA family transcriptional regulator | |||
| 13270 | M | M.Sen9941ORF2717P (100% identity) | M.SenSW70ORF13270P | |
| 13275 | phage N-6-adenine-methyltransferase | |||
| 13270 | DNA cytosine methyltransferase | |||
| 13275 | M | M.Sen9941ORF2718P (100% identity) | M.SenSW70ORF13275P | |
| 13280 | PerC family transcriptional regulator | |||
| 19555 | YebC/PmpR family DNA-binding transcriptional | |||
| 19560 | R | Sen9941ORF4057P (100% identity) | SenSW70ORF19560P | |
| 19565 | 64 aa hypothetical protein | |||
| 19665 | 5-nucleotidase | |||
| 19670 | R | Sen9941ORF4076P (100% identity) | SenSW70ORF19670P | |
| 19675 | helix-turn-helix transcriptional regulator | |||
| plasmid pSW37-267106 | ||||
| 22810 | 55 aa hypothetical protein | |||
| 22815 | M | M.Ssp15303DcmP (100% identity) | M.SenSW70DcmP | |
| 22820 | thermonuclease family protein | |||
| 23285 | 106 aa hypothetical protein | |||
| 23290 | M | M.SmapR478ORF272P (100% identity) | M.SenSW70ORF23290P | |
| 23295 | 202 aa hypothetical protein | |||
| 23415 | DNA-binding protein | |||
| 23420 | M | M.Ssp15303ORFEP (100% identity) | M.SenSW70ORF23420P | |
| 23425 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17185 | 33 aa hypothetical protein | |||
| 17190 | R | SenWC80ORFAP (99% identity) | CAGAG | SenSW70ORF17195P |
| 17195 | M | M.SenE15ORF17545P (100% identity) | CAGAG | M.SenSW70ORF17195P |
| 17200 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19410 | BrnT family toxin | |||
| 19415 | R | StyTMrrP (100% identity) | SenSW70MrrP | |
| 19420 | type I restriction-modification system | |||