Sphingomonas species AP4-R1 |
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Putative Sphingomonas species AP4-R1 RM systems
Ref: Heo,J. et al. unpublished
REBASE ref # 28173
| Sequence length: | GenBank #: | |
| Chromosome: | 5,252,057 bp | CP053346 |
| plasmid unnamed1: | 22,113 bp | CP053347 |
REBASE acronym: SspAP4R1
Org_num: 39864
All begin HL653_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4310 | AAA family ATPase | |||
| 4315 | S | S.SmaT5020ORFCP (62% identity) | S.SspAP4R1ORF4320P | |
| 4320 | M | M.Pch1606ORF4610P (71% identity) | M.SspAP4R1ORF4320P | |
| 4325 | type II toxin-antitoxin system HipA family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 295 | 263 aa hypothetical protein | |||
| 300 | RM | CbaKF708ORFDP (57% identity) | SspAP4R1ORF300P | |
| 305 | 322 aa hypothetical protein | |||
| 7060 | excinuclease ABC subunit UvrA | |||
| 7065 | M | M.Esp20A1MORF9190P (59% identity) | M.SspAP4R1ORF7065P | |
| 7075 | competence protein | |||
| 9085 | aa3-type cytochrome c oxidase subunit IV | |||
| ??? | M | M.SspSRS2ORF3145P (71% identity) | M.SspAP4R1ORF9090P | |
| 9095 | 59 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 23820 | M | M.Psp29362SspAP (71% identity) | M.SspAP4R1ORF23820P | |
| 23825 | 304 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14975 | 180 aa hypothetical protein | |||
| 14980 | M | M.Psp3H17SspAP (58% identity) | M.SspAP4R1ORF14980P | |
| 14985 | R | AatDY36ORF582P (80% identity) | SspAP4R1ORF14980P | |
| 14995 | 113 aa hypothetical protein | |||