Spirosoma species CJU-R4 |
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Putative Spirosoma species CJU-R4 RM systems
Ref: Heo,J. et al. unpublished
REBASE ref # 28173
| Sequence length: | GenBank #: | |
| Chromosome: | 5,761,753 bp | CP051677 |
| plasmid unnamed1: | 268,465 bp | CP051678 |
| plasmid unnamed2: | 19,319 bp | CP051679 |
REBASE acronym: SspR4
Org_num: 39857
All begin HH216_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed1 | ||||
| 24515 | ImmA/IrrE family metallo-endopeptidase | |||
| 24520 | M | M.Hsp2118ORFAP (57% identity) | GCCANNNNNCTT | M.SspR4I |
| 24525 | S | S.Hsp2118ORFAP (41% identity) | GCCANNNNNCTT | S.SspR4I |
| 24530 | 83 aa hypothetical protein | |||
| 24535 | AAA family ATPase | |||
| 24540 | R | Hsp2118ORFAP (54% identity) | GCCANNNNNCTT | SspR4IP |
| 24545 | 138 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4780 | 520 aa hypothetical protein | |||
| 4785 | RM | SspSC414ORF17620P (75% identity) | SspR4ORF4785P | |
| 4790 | VCBS repeat-containing protein | |||
| 9415 | nuclear transport factor 2 family protein | |||
| 9420 | M | M.Sth15344ORF14020P (62% identity) | M.SspR4ORF9420P | |
| 9425 | helix-turn-helix domain-containing protein | |||
| 9425 | helix-turn-helix domain-containing protein | |||
| 9430 | R | PboPX4ORF3181P (30% identity) | SspR4ORF9430P | |
| 9435 | xylose isomerase | |||
| 24105 | SDR family oxidoreductase | |||
| 24110 | R | SspRHs26ORF17605P (69% identity) | SspR4ORF24110P | |
| 24115 | 114 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 25070 | 325 aa hypothetical protein | |||
| 25075 | RM | FspSB02ORF7845P (55% identity) | SspR4ORF25075P | |
| 25080 | ATP-binding protein | |||
| plasmid unnamed2 | ||||
| 25390 | 354 aa hypothetical protein | |||
| 25395 | M | M.Pgu31ORF23465P (55% identity) | M.SspR4ORF25395P | |
| 25400 | type IV secretion system DNA-binding | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2620 | carbohydrate binding family 9 domain-containing | |||
| 2625 | R | Lin22510ORFBP (82% identity) | SspR4ORF2635P | |
| 2630 | ATP-binding protein | |||
| ??? | M | M.DzeA5410ORF16170P (38% identity) | M.SspR4ORF2635P | |
| 2650 | 110 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed1 | ||||
| 25085 | RloB domain-containing protein | |||
| 25090 | R | Ssp42546McrCP (52% identity) | SspR4McrCP | |
| 25095 | R | Ssp42546McrBP (17% identity) | SspR4McrBP | |
| 25100 | recombinase family protein | |||