Avibacterium paragallinarum ADL-AP15 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Avibacterium paragallinarum ADL-AP15 RM systems
Ref: Byukusenge,M. et al. unpublished
REBASE ref # 30286
Complete sequence: 2,415,950 bp
GenBank #: CP051638
REBASE acronym: ApaAP15
Org_num: 39973
All begin HHJ60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9125 | site-specific integrase | |||
| 9130 | S | S1.ApaAP17ORF9105P (100% identity) | S1.ApaAP15ORF9135P | |
| 9135 | M | M.ApaESV135ORF11005P (100% identity) | M.ApaAP15ORF9135P | |
| 9140 | S | S2.ApaAP17ORF9105P (100% identity) | S2.ApaAP15ORF9135P | |
| 9145 | S | S1.ApaESV135ORF11005P (100% identity) | S3.ApaAP15ORF9135P | |
| 9150 | MFS transporter | |||
| 10775 | DUF927 domain-containing protein | |||
| 10780 | R | ApaAP17ORF10770P (100% identity) | ApaAP15ORF10800P | |
| 10785 | MFS transporter | |||
| 10790 | 308 aa hypothetical protein | |||
| 10795 | S | S.ApaESV135ORF11455P (100% identity) | S.ApaAP15ORF10800P | |
| 10800 | M | M.ApaESV135ORF11455P (98% identity) | M.ApaAP15ORF10800P | |
| 10805 | 197 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 540 | phosphoglycerate dehydrogenase | |||
| 545 | RM | ApaESV135ORF8505P (100% identity) | ApaAP15ORF545P | |
| 550 | endolytic transglycosylase MltG | |||
| 4165 | ArsC family reductase | |||
| 4170 | M | M2.ApaESV135ORF3980P (100% identity) | M1.ApaAP15ORF4170P | |
| 4175 | R | ApasMORFGP (100% identity) | ApaAP15ORF4170P | |
| 4180 | M | M1.ApaESV135ORF3980P (100% identity) | M2.ApaAP15ORF4170P | |
| 4185 | threonine synthase | |||
| 6540 | valine--tRNA ligase | |||
| 6545 | R | ApaESV135ORF2500P (100% identity) | ApaAP15ORF6550P | |
| ??? | M | M.ApaESV135ORF2500P (100% identity) | M.ApaAP15ORF6550P | |
| 6555 | 159 aa hypothetical protein | |||
| 6885 | DUF1367 family protein | |||
| 6890 | M | M.ApaESV135ORF2155P (100% identity) | M.ApaAP15ORF6890P | |
| 6895 | ATP-binding protein | |||
| 7035 | 94 aa hypothetical protein | |||
| 7040 | M | M.ApaESV135ORF2010P (100% identity) | M.ApaAP15ORF7040P | |
| 7045 | SAM-dependent DNA methyltransferase | |||
| 7045 | SAM-dependent DNA methyltransferase | |||
| 7050 | M | M1.ApaESV135ORF2000P (100% identity) | M2.ApaAP15ORF7045P | |
| 7055 | 287 aa hypothetical protein | |||
| 10995 | helix-turn-helix domain-containing protein | |||
| 11000 | M | M1.ApaESV135ORF11650P (100% identity) | M1.ApaAP15ORF11000P | |
| 11005 | M | M2.ApaESV135ORF11650P (100% identity) | M2.ApaAP15ORF11000P | |
| 11010 | RM | ApaESV135ORF11650P (100% identity) | ApaAP15ORF11000P | |
| 11015 | 30S ribosomal protein S12 methylthiotransferase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4325 | IS3 family transposase | |||
| 4330 | R | ApaESV135ORF3825P (100% identity) | ApaAP15ORF4335P | |
| 4335 | M | M1.ApaAP10ORF4325P (100% identity) | M1.ApaAP15ORF4335P | |
| 4340 | M | M.ApaESV135ORF3825P (39% identity) | M2.ApaAP15ORF4335P | |
| 4345 | LysR family transcriptional regulator | |||
| 9080 | aminoacyl-histidine dipeptidase | |||
| 9085 | R | ApaESV135ORF11050P (100% identity) | ApaAP15ORF9090P | |
| 9090 | M | M.ApaESV135ORF11050P (100% identity) | M.ApaAP15ORF9090P | |
| 9095 | 105 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1680 | 3-dehydroquinate synthase | |||
| ??? | M | M.ApaESV135ORF7360P (100% identity) | M.ApaAP15ORF1685P | |
| 1690 | DUF721 domain-containing protein | |||