Escherichia species SCLE84 |
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Putative Escherichia species SCLE84 RM systems
Ref: He,J. unpublished
REBASE ref # 30307
| Sequence length: | GenBank #: | |
| Chromosome: | 5,024,521 bp | CP051430 |
| plasmid pSCLE1: | 217,533 bp | CP051431 |
| plasmid pSCLE2: | 45,814 bp | CP051432 |
| plasmid pSCLE3: | 96,595 bp | CP051433 |
REBASE acronym: EcoSCLE84
Org_num: 40100
All begin HGD79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6010 | GTPase family protein | |||
| 6015 | M | M.SflN97ORF14060P (100% identity) | M.EcoSCLE84ORF6015P | |
| 6020 | S | S.SflN97ORF14060P (100% identity) | S.EcoSCLE84ORF6015P | |
| 6025 | R | SflN97ORF14060P (99% identity) | EcoSCLE84ORF6015P | |
| 6030 | IS1 family transposase | |||
| 12585 | 128 aa hypothetical protein | |||
| 12590 | M | M.EcoSTEC866ORF20040P (100% identity) | M.EcoSCLE84ORF12590P | |
| 12595 | S | S.EcoSTEC640ORF20915P (100% identity) | S.EcoSCLE84ORF12590P | |
| 12600 | 433 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1035 | phosphohydrolase | |||
| 1040 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.EcoSCLE84DcmP |
| 1045 | V | V.SflFF59DcmP (100% identity) | V.EcoSCLE84DcmP | |
| 1050 | drug/metabolite exporter YedA | |||
| 7415 | replication endonuclease | |||
| 7420 | M | M.EcoW113ORFIP (100% identity) | GATC | M.EcoSCLE84ORF7420P |
| 7425 | TraR/DksA family transcriptional regulator | |||
| 9185 | DUF1317 family protein | |||
| 9190 | M | M.Sbo812ORFAP (100% identity) | M.EcoSCLE84ORF9190P | |
| 9195 | 93 aa hypothetical protein | |||
| 10660 | LexA family transcriptional regulator | |||
| 10665 | M | M.EcoRL465ORFFP (99% identity) | GATC | M.EcoSCLE84ORF10665P |
| 10670 | PerC family transcriptional regulator | |||
| 12565 | HNH endonuclease | |||
| 12570 | R | EcosB2CORFAP (100% identity) | EcoSCLE84ORF12570P | |
| 12575 | AAA domain-containing protein | |||
| 13945 | phage lysis protein EssD | |||
| 13950 | M | M.Eph460ORF53P (100% identity) | M.EcoSCLE84ORF13950P | |
| 13955 | 67 aa hypothetical protein | |||
| 13985 | LexA family transcriptional regulator | |||
| 13990 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoSCLE84ORF13990P |
| 13995 | PerC family transcriptional regulator | |||
| 17690 | cell division protein DamX | |||
| 17695 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSCLE84DamP |
| 17700 | ribulose-phosphate 3-epimerase | |||
| 18250 | DUF2556 family protein | |||
| 18255 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoSCLE84ORF18255P |
| 18260 | DNA-binding transcriptional regulator Fis | |||
| plasmid pSCLE1 | ||||
| 24860 | 55 aa hypothetical protein | |||
| 24865 | M | M.YpsF1ORFCP (100% identity) | M.EcoSCLE84ORF24865P | |
| 24870 | thermonuclease family protein | |||
| 25325 | 48 aa hypothetical protein | |||
| 25330 | M | M.YpsF1ORFBP (100% identity) | M.EcoSCLE84ORF25330P | |
| 25335 | 202 aa hypothetical protein | |||
| 25445 | DNA-binding protein | |||
| 25450 | M | M.YpsF1ORFDP (100% identity) | M.EcoSCLE84ORF25450P | |
| 25455 | 284 aa hypothetical protein | |||
| plasmid pSCLE2 | ||||
| 25515 | IS6-like element IS26 family transposase | |||
| 25520 | R | Ssp3CORF24390P (100% identity) | CCWGG | EcoSCLE84ORF25525P |
| 25525 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.EcoSCLE84ORF25525P |
| 25530 | IS1 family transposase | |||
| plasmid pSCLE3 | ||||
| 26010 | 103 aa hypothetical protein | |||
| 26015 | M | M.SflLIN4ORF23595P (99% identity) | M.EcoSCLE84ORF26015P | |
| 26020 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6195 | IS5 family transposase | |||
| 6200 | R | SflN97McrCP (100% identity) | EcoSCLE84McrCP | |
| 6205 | R | SflN97McrBP (100% identity) | EcoSCLE84McrBP | |
| 6210 | 141 aa hypothetical protein | |||