Burkholderia pseudomallei isolate UKMR15 |
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Putative Burkholderia pseudomallei isolate UKMR15 RM systems
Ref: Nathan,S. unpublished
REBASE ref # 30372
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,066,496 bp | LR595898 |
| chromosome 2: | 3,112,891 bp | LR595899 |
REBASE acronym: BpsMR15
Org_num: 40220
All begin UKMR15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 4060 | recombinase family protein | |||
| 4061 | R | BpsSW9ORF5553P (100% identity) | CCAYNNNNNNNCTTC | BpsMR15ORF4062P |
| 4062 | M | M.BpsSW9ORF5553P (100% identity) | CCAYNNNNNNNCTTC | M.BpsMR15ORF4062P |
| 4063 | S | S.BpsSW9ORF5553P (100% identity) | CCAYNNNNNNNCTTC | S.BpsMR15ORF4062P |
| 4064 | beta family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 162 | phage baseplate assembly protein | |||
| 163 | M | M.BpsR15ORFGP (66% identity) | M.BpsMR15ORF163P | |
| 164 | 176 aa hypothetical protein | |||
| 2332 | 88 aa conserved hypothetical protein | |||
| 2333 | M | M.BpsR15ORFFP (81% identity) | M.BpsMR15ORF2333P | |
| 2334 | DNA adenine methylase | |||
| 2730 | 162 aa hypothetical protein | |||
| 2731 | M | M.BpsSW9ORF4020P (100% identity) | M.BpsMR15ORF2731P | |
| 2732 | 69 aa hypothetical protein | |||
| 3231 | 165 aa hypothetical protein | |||
| 3232 | RM | BpsToORF31030P (100% identity) | TACCNAG | BpsMR15ORF3232P |
| 3233 | 364 aa hypothetical protein | |||
| 3299 | DEAD/DEAH box helicase | |||
| 3300 | RM | BpsR15ORFBP (100% identity) | BpsMR15ORF3300P | |
| 3301 | DEAD/DEAH box helicase | |||
| 3301 | DEAD/DEAH box helicase | |||
| ??? | V | V.BpsR15ORFCP (100% identity) | V.BpsMR15ORF3302P | |
| 3302 | M | M.BpsR15ORFCP (70% identity) | M.BpsMR15ORF3302P | |
| 3303 | Prophage CP4-57 regulatory protein | |||
| chromosome 2 | ||||
| 5483 | tryptophan synthase, alpha subunit | |||
| 5484 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.BpsMR15ORF5484P |
| 5485 | Tryptophan synthase beta chain | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 43 | outer membrane protein -like protein | |||
| 44 | M | M.BpsR15II (99% identity) | CACAG | M.BpsMR15ORF44P |
| 45 | R | BpsR15IIP (100% identity) | CACAG | BpsMR15ORF44P |
| 46 | 34 aa hypothetical protein BURPSS13_F0055 | |||