Burkholderia pseudomallei isolate UKMH10 |
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Putative Burkholderia pseudomallei isolate UKMH10 RM systems
Ref: Nathan,S. unpublished
REBASE ref # 30372
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,098,130 bp | LR595892 |
| chromosome 2: | 3,189,310 bp | LR595893 |
REBASE acronym: BpsMH10
Org_num: 40219
All begin UKMH10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3300 | 75 aa hypothetical protein | |||
| 3301 | R | BpsV44ORF3360P (100% identity) | GTCANNNNNNTGG | BpsMH10ORF3302P |
| ??? | S | S.BpsToORF31690P (100% identity) | GTCANNNNNNTGG | S.BpsMH10ORF3302P |
| 3302 | M | M.BpsH10I (100% identity) | GTCANNNNNNTGG | M.BpsMH10ORF3302P |
| 3303 | 321 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1032 | lysozyme | |||
| 1033 | M | M.BpsToORF10280P (100% identity) | M.BpsMH10ORF1033P | |
| 1034 | 121 aa hypothetical protein | |||
| 1409 | gp65 | |||
| ??? | M | M.BpsH10ORFLP (100% identity) | M.BpsMH10ORF1410P | |
| 1411 | DNA methylase | |||
| 1410 | 48 aa hypothetical protein | |||
| 1411 | M | M.BpsPHLS6ORF4040P (95% identity) | M.BpsMH10ORF1411P | |
| 1412 | 320 aa hypothetical protein | |||
| 3235 | 222 aa hypothetical protein | |||
| 3236 | RM | BpsToORF31030P (100% identity) | TACCNAG | BpsMH10ORF3236P |
| 3237 | Ribosome-binding ATPase YchF | |||
| 3295 | phage tail completion protein | |||
| 3296 | M | M.BpscmORF8865P (100% identity) | M.BpsMH10ORF3296P | |
| 3297 | phage tail protein I | |||
| 3548 | 176 aa hypothetical protein,hypothetical protein | |||
| 3549 | M | M.BtlORF1338P (91% identity) | M.BpsMH10ORF3549P | |
| 3550 | 226 aa hypothetical protein | |||
| chromosome 2 | ||||
| 5524 | replicative DNA helicase | |||
| 5525 | M | M.BpsPHLS6ORF5765P (100% identity) | M.BpsMH10ORF5525P | |
| 5526 | 89 aa hypothetical protein | |||
| 5603 | Tryptophan synthase alpha chain | |||
| 5604 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.BpsMH10ORF5604P |
| 5605 | Tryptophan synthase beta chain | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 42 | porin | |||
| 43 | M | M.BspBGKORF17P (99% identity) | CACAG | M.BpsMH10ORF43P |
| 44 | R | BpsToORF420P (100% identity) | CACAG | BpsMH10ORF43P |
| 45 | 34 aa hypothetical protein | |||