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Putative Salmonella enterica subsp. enterica serovar Typhimurium ST45 RM systems
Ref: Chen,Z. unpublished
REBASE ref # 29897
Sequence length: | GenBank #: | |
Chromosome: | 4,995,493 bp | CP050753 |
plasmid pST45-1: | 260,432 bp | CP050754 |
REBASE acronym: SenST45
Org_num: 41149
All begin HEC86_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20505 | restriction endonuclease | |||
20510 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenST45ORF20515P |
20515 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenST45ORF20515P |
20520 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenST45ORF20515P |
20525 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1815 | cell division protein DamX | |||
1820 | M | M.StyTDamP (100% identity) | GATC | M.SenST45DamP |
1825 | ribulose-phosphate 3-epimerase | |||
2310 | DUF2556 family protein | |||
2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenST45ORF2315P |
2320 | DNA-binding transcriptional regulator Fis | |||
3230 | DUF2732 family protein | |||
3235 | M | M.SensSZL38ORF19965P (100% identity) | M.SenST45ORF3235P | |
3240 | replication endonuclease | |||
5620 | IS6-like element IS26 family transposase | |||
5625 | M | M.StyCORF187P (49% identity) | M.SenST45ORF5625P | |
5630 | thermonuclease family protein | |||
6305 | ead/Ea22-like family protein | |||
6310 | M | M.StyTORF1914P (100% identity) | M.SenST45ORF6310P | |
6315 | 92 aa hypothetical protein | |||
9630 | PerC family transcriptional regulator | |||
??? | M | M.SenceORFKP (100% identity) | M.SenST45ORF9635P | |
9640 | RusA family crossover junction | |||
9880 | phosphohydrolase | |||
9885 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenST45DcmP |
9890 | V | V.StyUK1DcmP (100% identity) | V.SenST45DcmP | |
9895 | drug/metabolite exporter YedA | |||
20665 | BREX system P-loop protein BrxC | |||
20670 | RM | StyUK1IV (100% identity) | GATCAG | SenST45ORF20670P |
20675 | AAA family ATPase | |||
plasmid pST45-1 | ||||
24870 | 55 aa hypothetical protein | |||
24875 | M | M.YpsF1ORFCP (100% identity) | M.SenST45ORF24875P | |
24880 | thermonuclease family protein | |||
25575 | 73 aa hypothetical protein | |||
25580 | M | M.SenST46ORF25580P (100% identity) | M.SenST45ORF25580P | |
25585 | 102 aa hypothetical protein | |||
25675 | IS1 family transposase | |||
25680 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.SenST45ORF25680P |
25685 | R | Ssp3CORF24390P (100% identity) | CCWGG | SenST45ORF25680P |
25690 | IS6-like element IS26 family transposase | |||
25750 | DNA-binding protein | |||
25755 | M | M.YpsF1ORFDP (100% identity) | M.SenST45ORF25755P | |
25760 | 284 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
17980 | 33 aa hypothetical protein | |||
17985 | R | StyUK1IP (99% identity) | CAGAG | SenST45ORF17990P |
17990 | M | M.StyUK1I (100% identity) | CAGAG | M.SenST45ORF17990P |
17995 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20500 | BrnT family toxin | |||
20505 | R | StyUK1MrrP (100% identity) | SenST45MrrP | |
20510 | type I restriction-modification system |