Salmonella enterica subsp. enterica serovar Typhimurium ST56 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium ST56 RM systems
Ref: Chen,Z. unpublished
REBASE ref # 29897
| Sequence length: | GenBank #: | |
| Chromosome: | 4,948,999 bp | CP050739 |
| plasmid pST56-2: | 108,574 bp | CP050741 |
REBASE acronym: SenST56
Org_num: 41152
All begin HEC89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20720 | restriction endonuclease | |||
| 20725 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | SenST56ORF20730P |
| 20730 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenST56ORF20730P |
| 20735 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenST56ORF20730P |
| 20740 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2290 | cell division protein DamX | |||
| 2295 | M | M.StyTDamP (100% identity) | GATC | M.SenST56DamP |
| 2300 | ribulose-phosphate 3-epimerase | |||
| 2785 | DUF2556 family protein | |||
| 2790 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenST56ORF2790P |
| 2795 | DNA-binding transcriptional regulator Fis | |||
| 10375 | phosphohydrolase | |||
| 10380 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenST56DcmP |
| 10385 | V | V.StyUK1DcmP (100% identity) | V.SenST56DcmP | |
| 10390 | drug/metabolite exporter YedA | |||
| 20880 | BREX system P-loop protein BrxC | |||
| 20885 | RM | StyUK1IV (100% identity) | GATCAG | SenST56ORF20885P |
| 20890 | AAA family ATPase | |||
| plasmid pST56-2 | ||||
| 25560 | 73 aa hypothetical protein | |||
| 25565 | M | M.StyUK1ORFAP (100% identity) | M.SenST56ORF25565P | |
| 25570 | 63 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20715 | BrnT family toxin | |||
| 20720 | R | StyUK1MrrP (100% identity) | SenST56MrrP | |
| 20725 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6400 | TraR/DksA family transcriptional regulator | |||
| 6405 | M | M.StyLTORF13745P (100% identity) | M.SenST56ORF6405P | |
| 6410 | replication endonuclease | |||