Salmonella enterica subsp. enterica serovar Typhimurium ST106 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium ST106 RM systems
Ref: Chen,Z. unpublished
REBASE ref # 29897
| Sequence length: | GenBank #: | |
| Chromosome: | 4,962,482 bp | CP050728 |
| plasmid pST106-1: | 230,228 bp | CP050729 |
REBASE acronym: SenST106
Org_num: 41147
All begin HEC92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20345 | restriction endonuclease | |||
| 20350 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenST106ORF20355P |
| 20355 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenST106ORF20355P |
| 20360 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenST106ORF20355P |
| 20365 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.SenST106DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenST106ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 3230 | DUF2732 family protein | |||
| 3235 | M | M.SensSZL38ORF19965P (100% identity) | M.SenST106ORF3235P | |
| 3240 | replication endonuclease | |||
| 5620 | IS6-like element IS26 family transposase | |||
| 5625 | M | M.StyCORF187P (49% identity) | M.SenST106ORF5625P | |
| 5630 | thermonuclease family protein | |||
| 6155 | ead/Ea22-like family protein | |||
| 6160 | M | M.StyTORF1914P (100% identity) | M.SenST106ORF6160P | |
| 6165 | 92 aa hypothetical protein | |||
| 9475 | PerC family transcriptional regulator | |||
| ??? | M | M.SenPS1ORF9505P (94% identity) | M.SenST106ORF9480P | |
| 9485 | RusA family crossover junction | |||
| 9725 | phosphohydrolase | |||
| 9730 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenST106DcmP |
| 9735 | V | V.StyUK1DcmP (100% identity) | V.SenST106DcmP | |
| 9740 | drug/metabolite exporter YedA | |||
| 20505 | BREX system P-loop protein BrxC | |||
| 20510 | RM | StyUK1IV (100% identity) | GATCAG | SenST106ORF20510P |
| 20515 | AAA family ATPase | |||
| plasmid pST106-1 | ||||
| 24710 | 55 aa hypothetical protein | |||
| 24715 | M | M.YpsF1ORFCP (100% identity) | M.SenST106ORF24715P | |
| 24720 | 292 aa hypothetical protein | |||
| 25285 | 48 aa hypothetical protein | |||
| 25290 | M | M.YpsF1ORFBP (100% identity) | M.SenST106ORF25290P | |
| 25295 | 202 aa hypothetical protein | |||
| 25405 | DNA-binding protein | |||
| 25410 | M | M.YpsF1ORFDP (100% identity) | M.SenST106ORF25410P | |
| 25415 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17820 | 33 aa hypothetical protein | |||
| 17825 | R | StyUK1IP (99% identity) | CAGAG | SenST106ORF17830P |
| 17830 | M | M.StyUK1I (100% identity) | CAGAG | M.SenST106ORF17830P |
| 17835 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20340 | BrnT family toxin | |||
| 20345 | R | StyUK1MrrP (100% identity) | SenST106MrrP | |
| 20350 | type I restriction-modification system | |||