Salmonella enterica subsp. enterica serovar Typhimurium ST101 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium ST101 RM systems
Ref: Chen,Z. unpublished
REBASE ref # 29897
| Sequence length: | GenBank #: | |
| Chromosome: | 5,038,546 bp | CP050731 |
| plasmid pST101-1: | 181,971 bp | CP050732 |
REBASE acronym: SenST101
Org_num: 41146
All begin HEC91_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20820 | restriction endonuclease | |||
| 20825 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenST101ORF20830P |
| 20830 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenST101ORF20830P |
| 20835 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenST101ORF20830P |
| 20840 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1825 | cell division protein DamX | |||
| 1830 | M | M.StyTDamP (100% identity) | GATC | M.SenST101DamP |
| 1835 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenST101ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 3230 | DUF2732 family protein | |||
| 3235 | M | M.SensSZL38ORF19965P (100% identity) | M.SenST101ORF3235P | |
| 3240 | replication endonuclease | |||
| 6570 | ead/Ea22-like family protein | |||
| 6575 | M | M.StyTORF1914P (100% identity) | M.SenST101ORF6575P | |
| 6580 | 92 aa hypothetical protein | |||
| 9890 | PerC family transcriptional regulator | |||
| ??? | M | M.SenceORFKP (100% identity) | M.SenST101ORF9895P | |
| 9900 | RusA family crossover junction | |||
| 10155 | phosphohydrolase | |||
| 10160 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenST101DcmP |
| 10165 | V | V.StyUK1DcmP (100% identity) | V.SenST101DcmP | |
| 10170 | drug/metabolite exporter YedA | |||
| 20980 | BREX system P-loop protein BrxC | |||
| 20985 | RM | StyUK1IV (100% identity) | GATCAG | SenST101ORF20985P |
| 20990 | AAA family ATPase | |||
| plasmid pST101-1 | ||||
| 25290 | 102 aa hypothetical protein | |||
| 25295 | M | M.SenST46ORF25580P (100% identity) | M.SenST101ORF25295P | |
| 25300 | 73 aa hypothetical protein | |||
| 25635 | IS1 family transposase | |||
| 25640 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.SenST101ORF25640P |
| 25645 | R | Ssp3CORF24390P (100% identity) | CCWGG | SenST101ORF25640P |
| 25650 | IS6-like element IS26 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18290 | 33 aa hypothetical protein | |||
| 18295 | R | StyUK1IP (99% identity) | CAGAG | SenST101ORF18300P |
| 18300 | M | M.StyUK1I (100% identity) | CAGAG | M.SenST101ORF18300P |
| 18305 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20815 | BrnT family toxin | |||
| 20820 | R | StyUK1MrrP (100% identity) | SenST101MrrP | |
| 20825 | type I restriction-modification system | |||