Salmonella enterica subsp. enterica serovar Typhimurium ST113 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium ST113 RM systems
Ref: Chen,Z. unpublished
REBASE ref # 29897
| Sequence length: | GenBank #: | |
| Chromosome: | 4,974,417 bp | CP050726 |
| plasmid pST-1: | 147,578 bp | CP050727 |
REBASE acronym: SenST113
Org_num: 41148
All begin HEC93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20050 | restriction endonuclease | |||
| 20055 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenST113ORF20060P |
| 20060 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenST113ORF20060P |
| 20065 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenST113ORF20060P |
| 20070 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.StyTDamP (100% identity) | GATC | M.SenST113DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenST113ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 3245 | DUF2732 family protein | |||
| 3250 | M | M.SensSZL38ORF19965P (100% identity) | M.SenST113ORF3250P | |
| 3255 | replication endonuclease | |||
| 6080 | ead/Ea22-like family protein | |||
| 6085 | M | M.StyTORF1914P (100% identity) | M.SenST113ORF6085P | |
| 6090 | 92 aa hypothetical protein | |||
| 9400 | PerC family transcriptional regulator | |||
| ??? | M | M.SenceORFKP (100% identity) | M.SenST113ORF9405P | |
| 9410 | RusA family crossover junction | |||
| 9650 | phosphohydrolase | |||
| 9655 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenST113DcmP |
| 9660 | V | V.StyUK1DcmP (100% identity) | V.SenST113DcmP | |
| 9665 | drug/metabolite exporter YedA | |||
| 20210 | BREX system P-loop protein BrxC | |||
| 20215 | RM | StyUK1IV (100% identity) | GATCAG | SenST113ORF20215P |
| 20220 | AAA family ATPase | |||
| 22120 | LexA family transcriptional regulator | |||
| 22125 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.SenST113ORF22125P |
| 22130 | PerC family transcriptional regulator | |||
| plasmid pST-1 | ||||
| 24580 | IS6-like element IS26 family transposase | |||
| 24585 | R | Ssp3CORF24390P (100% identity) | CCWGG | SenST113ORF24590P |
| 24590 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.SenST113ORF24590P |
| 24595 | IS1 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17750 | 33 aa hypothetical protein | |||
| 17755 | R | StyUK1IP (99% identity) | CAGAG | SenST113ORF17760P |
| 17760 | M | M.StyUK1I (99% identity) | CAGAG | M.SenST113ORF17760P |
| 17765 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20045 | BrnT family toxin | |||
| 20050 | R | StyUK1MrrP (100% identity) | SenST113MrrP | |
| 20055 | type I restriction-modification system | |||