Salmonella enterica subsp. enterica serovar Typhimurium ST53 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium ST53 RM systems
Ref: Chen,Z. unpublished
REBASE ref # 29897
| Sequence length: | GenBank #: | |
| Chromosome: | 4,970,193 bp | CP050745 |
| plasmid pST53-1: | 115,084 bp | CP050746 |
| plasmid pST53-2: | 88,006 bp | CP050747 |
REBASE acronym: SenST53
Org_num: 41151
All begin HEC88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20330 | restriction endonuclease | |||
| 20335 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | SenST53ORF20340P |
| 20340 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenST53ORF20340P |
| 20345 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenST53ORF20340P |
| 20350 | endoribonuclease SymE | |||
| 21450 | AAA family ATPase | |||
| 21455 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.SenST53ORF21460P |
| 21460 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.SenST53ORF21460P |
| 21465 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | SenST53ORF21460P |
| 21470 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2270 | cell division protein DamX | |||
| 2275 | M | M.StyTDamP (100% identity) | GATC | M.SenST53DamP |
| 2280 | ribulose-phosphate 3-epimerase | |||
| 2765 | DUF2556 family protein | |||
| 2770 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenST53ORF2770P |
| 2775 | DNA-binding transcriptional regulator Fis | |||
| 10050 | phosphohydrolase | |||
| 10055 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenST53DcmP |
| 10060 | V | V.StyUK1DcmP (100% identity) | V.SenST53DcmP | |
| 10065 | drug/metabolite exporter YedA | |||
| 20490 | BREX system P-loop protein BrxC | |||
| 20495 | RM | StyUK1IV (100% identity) | GATCAG | SenST53ORF20495P |
| 20500 | AAA family ATPase | |||
| plasmid pST53-1 | ||||
| 24580 | 73 aa hypothetical protein | |||
| 24585 | M | M.StyUK1ORFAP (100% identity) | M.SenST53ORF24585P | |
| 24590 | 118 aa hypothetical protein | |||
| plasmid pST53-2 | ||||
| 25170 | 73 aa hypothetical protein | |||
| 25175 | M | M.Ssp14523ORF22990P (100% identity) | M.SenST53ORF25175P | |
| 25180 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18190 | 33 aa hypothetical protein | |||
| 18195 | R | StyUK1IP (93% identity) | SenST53ORF18195P | |
| 18200 | IS1 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20325 | BrnT family toxin | |||
| 20330 | R | StyUK1MrrP (100% identity) | SenST53MrrP | |
| 20335 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6765 | replication endonuclease | |||
| 6770 | M | M.StyLTORF13745P (100% identity) | M.SenST53ORF6770P | |
| 6775 | TraR/DksA family transcriptional regulator | |||