Salmonella enterica subsp. enterica serovar Typhimurium ST90 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium ST90 RM systems
Ref: Chen,Z. unpublished
REBASE ref # 29897
| Sequence length: | GenBank #: | |
| Chromosome: | 4,906,732 bp | CP050734 |
| plasmid pST90-1: | 150,326 bp | CP050735 |
| plasmid pST90-2: | 110,163 bp | CP050736 |
REBASE acronym: SenST90
Org_num: 41153
All begin HEC90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20440 | restriction endonuclease | |||
| 20445 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | SenST90ORF20450P |
| 20450 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenST90ORF20450P |
| 20455 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenST90ORF20450P |
| 20460 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2140 | cell division protein DamX | |||
| 2145 | M | M.StyTDamP (100% identity) | GATC | M.SenST90DamP |
| 2150 | ribulose-phosphate 3-epimerase | |||
| 2635 | DUF2556 family protein | |||
| 2640 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenST90ORF2640P |
| 2645 | DNA-binding transcriptional regulator Fis | |||
| 9920 | phosphohydrolase | |||
| 9925 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenST90DcmP |
| 9930 | V | V.StyUK1DcmP (100% identity) | V.SenST90DcmP | |
| 9935 | drug/metabolite exporter YedA | |||
| 20600 | BREX system P-loop protein BrxC | |||
| 20605 | RM | StyUK1IV (100% identity) | GATCAG | SenST90ORF20605P |
| 20610 | AAA family ATPase | |||
| plasmid pST90-1 | ||||
| 23970 | IS1 family transposase | |||
| 23975 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.SenST90ORF23975P |
| 23980 | R | Ssp3CORF24390P (100% identity) | CCWGG | SenST90ORF23975P |
| 23985 | IS6-like element IS26 family transposase | |||
| 24560 | 73 aa hypothetical protein | |||
| 24565 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.SenST90ORF24565P |
| 24570 | 102 aa hypothetical protein | |||
| plasmid pST90-2 | ||||
| 24875 | 118 aa hypothetical protein | |||
| 24880 | M | M.StyUK1ORFAP (100% identity) | M.SenST90ORF24880P | |
| 24885 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20435 | BrnT family toxin | |||
| 20440 | R | StyUK1MrrP (100% identity) | SenST90MrrP | |
| 20445 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5955 | TraR/DksA family transcriptional regulator | |||
| 5960 | M | M.StyLTORF13745P (100% identity) | M.SenST90ORF5960P | |
| 5965 | replication endonuclease | |||