Salmonella enterica subsp. enterica serovar Typhimurium ST46 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium ST46 RM systems
Ref: Chen,Z. unpublished
REBASE ref # 29897
| Sequence length: | GenBank #: | |
| Chromosome: | 4,994,712 bp | CP050750 |
| plasmid pST46-1: | 260,225 bp | CP050751 |
REBASE acronym: SenST46
Org_num: 41150
All begin HEC87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20505 | restriction endonuclease | |||
| 20510 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenST46ORF20515P |
| 20515 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenST46ORF20515P |
| 20520 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenST46ORF20515P |
| 20525 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | cell division protein DamX | |||
| 1825 | M | M.StyTDamP (100% identity) | GATC | M.SenST46DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenST46ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 3235 | DUF2732 family protein | |||
| 3240 | M | M.SensSZL38ORF19965P (100% identity) | M.SenST46ORF3240P | |
| 3245 | replication endonuclease | |||
| 5625 | IS6-like element IS26 family transposase | |||
| 5630 | M | M.StyCORF187P (49% identity) | M.SenST46ORF5630P | |
| 5635 | thermonuclease family protein | |||
| 6310 | ead/Ea22-like family protein | |||
| 6315 | M | M.StyTORF1914P (100% identity) | M.SenST46ORF6315P | |
| 6320 | 92 aa hypothetical protein | |||
| 9635 | PerC family transcriptional regulator | |||
| ??? | M | M.SenceORFKP (100% identity) | M.SenST46ORF9640P | |
| 9645 | RusA family crossover junction | |||
| 9885 | phosphohydrolase | |||
| 9890 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenST46DcmP |
| 9895 | V | V.StyUK1DcmP (100% identity) | V.SenST46DcmP | |
| 9900 | drug/metabolite exporter YedA | |||
| 20665 | BREX system P-loop protein BrxC | |||
| 20670 | RM | StyUK1IV (100% identity) | GATCAG | SenST46ORF20670P |
| 20675 | AAA family ATPase | |||
| plasmid pST46-1 | ||||
| 24870 | 55 aa hypothetical protein | |||
| 24875 | M | M.YpsF1ORFCP (100% identity) | M.SenST46ORF24875P | |
| 24880 | thermonuclease family protein | |||
| 25575 | 73 aa hypothetical protein | |||
| 25580 | M | M.SenST45ORF25580P (100% identity) | M.SenST46ORF25580P | |
| 25585 | 102 aa hypothetical protein | |||
| 25675 | IS1 family transposase | |||
| 25680 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.SenST46ORF25680P |
| 25685 | R | Ssp3CORF24390P (100% identity) | CCWGG | SenST46ORF25680P |
| 25690 | IS6-like element IS26 family transposase | |||
| 25750 | DNA-binding protein | |||
| 25755 | M | M.YpsF1ORFDP (100% identity) | M.SenST46ORF25755P | |
| 25760 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17980 | 33 aa hypothetical protein | |||
| 17985 | R | StyUK1IP (99% identity) | CAGAG | SenST46ORF17990P |
| 17990 | M | M.StyUK1I (100% identity) | CAGAG | M.SenST46ORF17990P |
| 17995 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20500 | BrnT family toxin | |||
| 20505 | R | StyUK1MrrP (100% identity) | SenST46MrrP | |
| 20510 | type I restriction-modification system | |||