Nocardioides species HDW12B |
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Putative Nocardioides species HDW12B RM systems
Ref: Hyun,D.-W. and Bae,J.-W. unpublished
REBASE ref # 30257
Complete sequence: 4,192,138 bp
GenBank #: CP049867
REBASE acronym: Nsp12B
Org_num: 40743
All begin G7072_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4085 | 83 aa hypothetical protein | |||
| 4090 | R | Msp102ORF3298P (65% identity) | Nsp12BORF4095P | |
| 4095 | M | M.MspTY59ORF45970P (54% identity) | M.Nsp12BORF4095P | |
| 4100 | 276 aa hypothetical protein | |||
| 13850 | AAA domain-containing protein | |||
| 13855 | R | Naq9944ORF1601P (96% identity) | Nsp12BORF13865P | |
| 13860 | S | S.Shi01646ORF40880P (44% identity) | S.Nsp12BORF13865P | |
| 13865 | M | M2.Naq9944ORF1601P (87% identity) | M2.Nsp12BORF13865P | |
| 13870 | M | M1.Naq9944ORF1601P (90% identity) | M1.Nsp12BORF13865P | |
| 13875 | 261 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4610 | glycerophosphodiester phosphodiesterase | |||
| 4615 | M | M.Nsp5002ORFAP (64% identity) | M.Nsp12BORF4615P | |
| 4620 | 60 aa hypothetical protein | |||
| 13910 | helix-turn-helix transcriptional regulator | |||
| 13915 | R | MmaNI (41% identity) | Nsp12BORF13915P | |
| 13920 | 387 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13840 | WYL domain-containing protein | |||
| 13845 | R | Ksp89McrCP (75% identity) | Nsp12BMcrCP | |
| 13850 | R | Ksp89McrBP (74% identity) | Nsp12BMcrBP | |
| 13855 | type I restriction endonuclease subunit R | |||