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Putative Rhodococcus fascians A21d2 RM systems
Ref: Savory,E.A. et al. unpublished
REBASE ref # 30633
Sequence length: | GenBank #: | |
Chromosome: | 5,667,798 bp | CP049748 |
plasmid pA21d2: | 189,682 bp | CP049749 |
plasmid unnamed1: | 76,960 bp | CP049750 |
plasmid unnamed2: | 75,360 bp | CP049751 |
REBASE acronym: RfaA21d2
Org_num: 40939
All begin BH92_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
340 | ABC transporter ATP-binding protein | |||
345 | M | M.RfaA25fORF3450P (99% identity) | M.RfaA21d2ORF345P | |
350 | V | V.RfaA25fORF3450P (98% identity) | V.RfaA21d2ORF345P | |
355 | 67 aa hypothetical protein | |||
1900 | 254 aa hypothetical protein | |||
1905 | M | M.RfaA25fORF1585P (98% identity) | M.RfaA21d2ORF1905P | |
1910 | R | RfaA25fORF1585P (98% identity) | RfaA21d2ORF1905P | |
1915 | LysR family transcriptional regulator | |||
7235 | GIY-YIG nuclease family protein | |||
7240 | RM | RspM09ORF5072P (84% identity) | RfaA21d2ORF7240P | |
7245 | 222 aa hypothetical protein | |||
21045 | 167 aa hypothetical protein | |||
21050 | M | M.RfaA25fORF9470P (87% identity) | M.RfaA21d2ORF21050P | |
21055 | helix-turn-helix transcriptional regulator | |||
21280 | 443 aa hypothetical protein | |||
21285 | M | M.Asp7876ORFAP (63% identity) | M.RfaA21d2ORF21285P | |
21290 | RM | CmiCNK2ORF2618P (52% identity) | RfaA21d2ORF21285P | |
21295 | 118 aa hypothetical protein | |||
plasmid pA21d2 | ||||
27160 | 279 aa hypothetical protein | |||
27165 | M | M.RspJG3ORFFP (90% identity) | M.RfaA21d2ORF27165P | |
27170 | 76 aa hypothetical protein | |||
plasmid unnamed1 | ||||
27515 | 74 aa hypothetical protein | |||
27520 | RM | MchNBB4ORF4775P (70% identity) | RfaA21d2ORF27520P | |
27525 | NACHT domain-containing protein | |||
plasmid unnamed2 | ||||
28210 | 558 aa hypothetical protein | |||
28215 | M | M.WneVSI01ORF8850P (47% identity) | M.RfaA21d2ORF28215P | |
28220 | Lsr2 family protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
21270 | restriction endonuclease | |||
21275 | R | Mru16372McrBP (38% identity) | RfaA21d2McrBP | |
21280 | R | RerXPMcrCP (41% identity) | RfaA21d2McrCP | |
21285 | class I SAM-dependent methyltransferase |