Escherichia coli CM IVRI KOL-1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli CM IVRI KOL-1 RM systems
Ref: Bandyopadhyay,S. et al. unpublished
REBASE ref # 30298
| Sequence length: | GenBank #: | |
| Chromosome: | 4,945,239 bp | CP033158 |
| plasmid p1ESCUMpO83_CORR: | 146,286 bp | CP033159 |
| plasmid pESBL-EA11p1ESCUM: | 62,055 bp | CP033160 |
REBASE acronym: EcoKOL1
Org_num: 39992
All begin EAF06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18000 | IS5-like element ISKpn26 family transposase | |||
| 18005 | R | Sfl877IIP (100% identity) | AAAYNNNNNNCTC | EcoKOL1ORF18015P |
| 18010 | S | S.Sfl877II (100% identity) | AAAYNNNNNNCTC | S.EcoKOL1ORF18015P |
| 18015 | M | M.Sso8ORF17680P (100% identity) | AAAYNNNNNNCTC | M.EcoKOL1ORF18015P |
| 18020 | GTPase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2345 | drug/metabolite exporter YedA | |||
| 2350 | V | V.SsoSE61DcmP (100% identity) | V.EcoKOL1DcmP | |
| 2355 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoKOL1DcmP |
| 2360 | phosphohydrolase | |||
| 9885 | Fis family transcriptional regulator | |||
| 9890 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoKOL1ORF9890P |
| 9895 | DUF2556 domain-containing protein | |||
| 10530 | ribulose-phosphate 3-epimerase | |||
| 10535 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoKOL1DamP |
| 10540 | protein DamX | |||
| 16135 | 67 aa hypothetical protein | |||
| 16140 | M | M.EcoYJ4ORFHP (100% identity) | M.EcoKOL1ORF16140P | |
| 16145 | lysis protein S | |||
| plasmid p1ESCUMpO83_CORR | ||||
| 25190 | 73 aa hypothetical protein | |||
| 25195 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoKOL1ORF24360P | |
| 25200 | 102 aa hypothetical protein | |||
| plasmid pESBL-EA11p1ESCUM | ||||
| 25555 | 103 aa hypothetical protein | |||
| 25560 | M | M.Ssp14523ORF22990P (100% identity) | M.EcoKOL1ORF25560P | |
| 25565 | 73 aa hypothetical protein | |||