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Putative Glaesserella parasuis sHPS7 RM systems
Ref: An,J. and Li,Y. unpublished
REBASE ref # 30440
Complete sequence: 2,276,207 bp
GenBank #: CP049088
REBASE acronym: GpaHPS7
Org_num: 40383
All begin G5C59_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3205 | histidinol-phosphate transaminase | |||
3210 | R | Hpa174ORF186P (100% identity) | GpaHPS7ORF3225P | |
3215 | FRG domain-containing protein | |||
3220 | S | S.Hpa174ORF186P (100% identity) | S.GpaHPS7ORF3225P | |
3225 | M | M.Gpa70512ORF5180P (99% identity) | M.GpaHPS7ORF3225P | |
3230 | 3-phosphoserine/phosphohydroxythreonine | |||
8500 | 16S rRNA (guanine(527)-N(7))-methyltransferase | |||
8505 | M | M.Hpa174ORF1057P (100% identity) | GTANNNNNNNCTTG | M.GpaHPS7ORF8505P |
8510 | 341 aa hypothetical protein | |||
8515 | 305 aa hypothetical protein | |||
8520 | R | Hpa906ORF10680P (99% identity) | GTANNNNNNNCTTG | GpaHPS7ORF8505P |
8525 | S | S.Gpa1804ORF11620P (99% identity) | GTANNNNNNNCTTG | S.GpaHPS7ORF8505P |
8530 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
10020 | transposase | |||
10025 | M | M.HpaSW114ORF1565P (100% identity) | M.GpaHPS7ORF10025P | |
10030 | AAA family ATPase | |||
10035 | S | S.HpaSW114ORF1565P (44% identity) | S2.GpaHPS7ORF10025P | |
10040 | S | S.Gpa70512ORF10680P (97% identity) | S3.GpaHPS7ORF10025P | |
10045 | DUF1829 domain-containing protein | |||
10050 | 145 aa hypothetical protein | |||
10055 | R | Gpa4ORF9940P (99% identity) | GpaHPS7ORF10025P | |
10060 | 87 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1485 | transposase | |||
??? | M | M.GpaHPS7ORF3655P (87% identity) | M.GpaHPS7ORF1490P | |
1500 | helix-turn-helix transcriptional regulator | |||
1995 | Com family DNA-binding transcriptional | |||
2000 | M | M.Hpa174ORF404P (100% identity) | M.GpaHPS7ORF2000P | |
2005 | 86 aa hypothetical protein | |||
2825 | recombination protein NinB | |||
2830 | M | M.GpaZ44ORF6930P (72% identity) | M.GpaHPS7ORF2830P | |
2835 | AAA family ATPase | |||
2870 | AAA family ATPase | |||
??? | M | M.Hpa906ORF3855P (96% identity) | M.GpaHPS7ORF2875P | |
2880 | 198 aa hypothetical protein | |||
5050 | 3-dehydroquinate synthase | |||
5055 | M | M.HpaST41ORF8035P (100% identity) | GATC | M.GpaHPS7ORF5055P |
5060 | sodium-dependent transporter | |||
6285 | Com family DNA-binding transcriptional | |||
6290 | M | M.HphSMORF53P (94% identity) | M.GpaHPS7ORF6290P | |
6295 | 86 aa hypothetical protein | |||
6600 | HlyD family efflux transporter periplasmic | |||
6605 | S | S.Hpa33ORF10915P (98% identity) | S.GpaHPS7ORF6610P | |
6610 | RM | Hpa174ORF514P (100% identity) | GpaHPS7ORF6610P | |
6615 | ISAs1 family transposase | |||
7295 | virulence RhuM family protein | |||
7300 | S | S2.Gpa1804ORF965P (100% identity) | S2.GpaHPS7ORF7310P | |
7305 | S | S1.Gpad76ORF945P (100% identity) | S1.GpaHPS7ORF7310P | |
7310 | RM | HpaH465ORF1079P (100% identity) | GpaHPS7ORF7310P | |
7315 | winged helix-turn-helix transcriptional |