Streptococcus pneumoniae NCTC11888 |
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Putative Streptococcus pneumoniae NCTC11888 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,230,670 bp
GenBank #: UHFY00000000 (NZ_UHFY00000000)
REBASE acronym: Spn11888
Org_num: 42716
All begin NCTC11888_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1353 | Uncharacterised protein | |||
| 1354 | S | S2.Spn2412ORF493P (100% identity) | S3.Spn11888IVP | |
| 1355 | S | S2.Spns521I (90% identity) | S2.Spn11888IVP | |
| 1356 | integrase/recombinase, phage integrase family | |||
| 1357 | type I restriction-modification system S | |||
| 1358 | M | M.Sps7493ORF8970P (100% identity) | CACNNNNNNNCTG | M.Spn11888IV |
| 1359 | R | Spn11888IP (100% identity) | CACNNNNNNNCTG | Spn11888IVP |
| 1360 | Protein of uncharacterised function (DUF2812) | |||
| 1356 | integrase/recombinase, phage integrase family | |||
| 1357 | S | S1.SpnR36AORF2250P (100% identity) | CACNNNNNNNCTT | S1.Spn11888ORF2329P |
| 1358 | type I restriction-modification system M | |||
| 2326 | Protein of uncharacterised function (DUF2812) | |||
| ??? | R | Spn11888IP (100% identity) | CACNNNNNNNCTG | Spn11888IVP |
| 2329 | M | M.Sps7493ORF8970P (100% identity) | CACNNNNNNNCTG | M.Spn11888IV |
| 2330 | type I restriction-modification system M | |||
| 2331 | S | S2.Spns521I (90% identity) | S2.Spn11888IVP | |
| 2332 | integrase/recombinase, phage integrase family | |||
| 2333 | S | S2.Spn2412ORF493P (100% identity) | S3.Spn11888IVP | |
| 2329 | type I restriction-modification system M | |||
| 2330 | S | S1.SpnR36AORF2250P (100% identity) | CACNNNNNNNCTT | S1.Spn11888ORF2329P |
| 2331 | type I restriction-modification system | |||
| 2350 | Protein of uncharacterised function (DUF2812) | |||
| 2351 | R | Spn11888IVP (100% identity) | CACNNNNNNNNTTC | Spn11888IP |
| 2352 | M | M.Sps7493ORF8970P (100% identity) | CACNNNNNNNNTTC | M.Spn11888I |
| 2353 | S | S3.SpnPORF531P (100% identity) | CACNNNNNNNNTTC | S1.Spn11888I |
| 2354 | S | S2.Spns521I (90% identity) | S2.Spn11888IP | |
| 2355 | integrase/recombinase, phage integrase family | |||
| 2356 | S | S4.Spnd6c8ORF494P (56% identity) | S3.Spn11888IP | |
| 2357 | Uncharacterised protein | |||
| 1707 | carbamoylphosphate synthase large subunit | |||
| 1708 | M | M.SpnsD39dORF3010P (99% identity) | TGANNNNNNNTATC | M.Spn11888III |
| 1709 | S | S1.SpnST62ORF5795P (99% identity) | TGANNNNNNNTATC | S1.Spn11888III |
| 1710 | toxin-antitoxin system, antitoxin component,AbrB | |||
| 1711 | prophage maintenance system killer protein | |||
| 1712 | integrase/recombinase, phage integrase family | |||
| 1713 | S | S3.SpnBC1ORF10460P (67% identity) | S2.Spn11888IIIP | |
| 1714 | R | SpnV0139ORF6580P (99% identity) | TGANNNNNNNTATC | Spn11888IIIP |
| 1715 | arginine repressor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1412 | valyl-tRNA synthetase | |||
| 1413 | M | M.Spnp1ORF5090P (100% identity) | M.Spn11888ORF1413P | |
| 1414 | Predicted ATP-binding protein involved in | |||
| 350 | xanthine permease | |||
| 351 | R | SpnPORF1849P (100% identity) | GATC | Spn11888IIP |
| 352 | M | M1.SpnD141ORF1793P (100% identity) | GATC | M1.Spn11888II |
| 353 | M | M2.SpnD141ORF1793P (100% identity) | GATC | M2.Spn11888II |
| 354 | thioesterase | |||
| 2188 | U32 family peptidase | |||
| ??? | R | Spnp4ORF13650P (100% identity) | Spn11888ORF2191P | |
| ??? | M | M.Spns521III (100% identity) | M.Spn11888ORF2191P | |
| 2193 | AraC family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2026 | GMP reductase | |||
| 2027 | R | Spnp2McrCP (99% identity) | Spn11888McrCP | |
| 2028 | R | Spn6816McrBP (100% identity) | Spn11888McrBP | |
| 2029 | translation factor | |||