Shigella flexneri NCTC12698 |
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Putative Shigella flexneri NCTC12698 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,785,068 bp
GenBank #: UAUS00000000 (NZ_UAUS00000000)
REBASE acronym: Sfl12698
Org_num: 42370
All begin NCTC12698_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2627 | Uncharacterized conserved protein | |||
| 2629 | S | S.SflPE577ORF23095P (100% identity) | GTANNNNNNNNGTCY | S.Sfl12698I |
| 2630 | M | M.SspS13ORF3945P (100% identity) | GTANNNNNNNNGTCY | M.Sfl12698I |
| 2631 | R | SflTORF4636P (100% identity) | GTANNNNNNNNGTCY | Sfl12698IP |
| 2632 | IS1 ORF2 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 79 | transmembrane subunit | |||
| 80 | V | V.SflTDcmP (100% identity) | V.Sfl12698DcmP | |
| 81 | M | M.Sfl12022DcmP (100% identity) | CCWGG | M.Sfl12698DcmP |
| 82 | HD superfamily hydrolase | |||
| 3072 | PerC transcriptional activator | |||
| 3073 | M | M.Sfl12022ORF2353P (100% identity) | GATC | M.Sfl12698ORF3073P |
| 3074 | LexA repressor | |||
| 5116 | Uncharacterised protein | |||
| 5117 | M | M.Sso524ORF460P (65% identity) | M.Sfl12698ORF5117P | |
| 3148 | Protein ninB | |||
| 3149 | M | M.Sfl12022ORF3970P (100% identity) | GATC | M.Sfl12698ORF3149P |
| 3150 | Protein of uncharacterised function (DUF2591) | |||
| 1449 | DNA-binding protein Fis | |||
| 1450 | M | M.SflTORF3517P (100% identity) | ATGCAT | M.Sfl12698ORF1450P |
| 1451 | Protein of uncharacterised function (DUF2556) | |||
| 1561 | ribulose-phosphate 3-epimerase | |||
| 1562 | M | M.SflTDamP (100% identity) | GATC | M.Sfl12698DamP |
| 1563 | cell division protein DamX | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4984 | Uncharacterised protein | |||
| 4985 | M | M.Sso524ORF460P (100% identity) | M.Sfl12698ORF4985P | |
| 4986 | Uncharacterised protein | |||