Shewanella putrefaciens NCTC10738 |
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Putative Shewanella putrefaciens NCTC10738 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,997,042 bp
GenBank #: UGYO00000000 (NZ_UGYO00000000)
REBASE acronym: Spu10738
Org_num: 42364
All begin NCTC10738_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3561 | Uracil phosphoribosyltransferase | |||
| 3562 | M | M.DdeGORF2868P (98% identity) | CACNNNNNNRTTC | M.Spu10738II |
| 3563 | S | S.SenLG26II (70% identity) | CACNNNNNNRTTC | S.Spu10738II |
| 3564 | R | DdeGORF2868P (98% identity) | CACNNNNNNRTTC | Spu10738IIP |
| 3565 | Transposase and inactivated derivatives | |||
| 3768 | EcoKI restriction-modification system protein | |||
| 3769 | M | M2.Vpa82E4ORF16820P (99% identity) | RGACNNNNNNTAG | M.Spu10738I |
| 3770 | S | S.Pvu063ORF1820P (60% identity) | RGACNNNNNNTAG | S.Spu10738I |
| 3771 | 5-methylcytosine-specific restriction enzyme B | |||
| 3772 | 5-methylcytosine-specific restriction enzyme | |||
| 3773 | R | Csp2007ORFEP (77% identity) | Spu10738ORF3773P | |
| 3774 | Protein of uncharacterised function DUF45 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 899 | Protein of uncharacterised function (DUF1696) | |||
| ??? | M | M.Sal5466ORFAP (100% identity) | M.Spu10738ORF900P | |
| 901 | DNA methylase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 415 | Uncharacterised protein | |||
| 416 | R | VfuMT14ORF8380P (99% identity) | CARCCC | Spu10738IVP |
| 417 | M | M.VflA21I (88% identity) | CARCCC | M.Spu10738IV |
| 418 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3770 | EcoKI restriction-modification system protein | |||
| 3771 | R | Sal4KRMcrBP (96% identity) | Spu10738McrBP | |
| 3772 | R | Sal4KRMcrCP (98% identity) | Spu10738McrCP | |
| 3773 | Type-1 restriction enzyme R protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1333 | Protein of uncharacterised function (DUF2970) | |||
| 1334 | M | M.SalR1ORF3655P (100% identity) | GATC | M.Spu10738III |
| 1335 | Uncharacterized protein conserved in bacteria | |||