Shewanella baltica NCTC10735 |
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Putative Shewanella baltica NCTC10735 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,300,842 bp
GenBank #: UGYM00000000 (NZ_UGYM00000000)
REBASE acronym: Sba10735
Org_num: 42361
All begin NCTC10735_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 42 | Protein of uncharacterised function DUF45 | |||
| 43 | R | Sba128ORFGP (98% identity) | GTTANNNNNNATGC | Sba10735IP |
| 44 | Uncharacterised protein | |||
| 45 | Uncharacterised protein | |||
| 46 | Uncharacterised protein | |||
| 47 | Virulence protein | |||
| 48 | S | S.SonBORF2355P (30% identity) | GTTANNNNNNATGC | S.Sba10735I |
| 49 | M | M.Spu51649ORF2025P (90% identity) | GTTANNNNNNATGC | M.Sba10735I |
| 50 | Protein of uncharacterised function (DUF3296) | |||
| 2177 | Uncharacterised protein | |||
| 2178 | S | S.MspD104ORF13705P (52% identity) | S.Sba10735ORF2181P | |
| 2179 | Transposase DDE domain | |||
| 2180 | Uncharacterised protein | |||
| 2181 | M | M.Sba128ORFCP (97% identity) | M.Sba10735ORF2181P | |
| 2182 | R | Sba185ORF1977P (99% identity) | Sba10735ORF2181P | |
| 2183 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1884 | Predicted transcriptional regulator | |||
| 1885 | R | SonBDptFP (99% identity) | Sba10735DptFP | |
| 1886 | DNA phosphorothioation-dependent restriction | |||
| 1885 | DNA phosphorothioation-dependent restriction | |||
| 1886 | R | SonBDptGP (100% identity) | Sba10735DptGP | |
| 1887 | Type IV secretory pathway, VirB4 components | |||
| 1886 | DNA phosphorothioation-dependent restriction | |||
| 1887 | R | SonBDptHP (99% identity) | Sba10735DptHP | |
| 1888 | DGQHR domain | |||
| 1889 | Uncharacterised protein | |||
| 1890 | M | M.SonBDndEP (88% identity) | M.Sba10735DndEP | |
| 1891 | recombination protein F | |||
| 1890 | DNA sulfur modification protein DndE | |||
| 1891 | M | M.SonBDndDP (98% identity) | M.Sba10735DndDP | |
| 1892 | PUA domain (predicted RNA-binding domain) | |||
| 1891 | recombination protein F | |||
| 1892 | M | M.SonBDndCP (100% identity) | M.Sba10735DndCP | |
| 1893 | DNA sulfur modification protein DndB | |||
| 1892 | PUA domain (predicted RNA-binding domain) | |||
| 1893 | M | M.SonBDndBP (100% identity) | M.Sba10735DndBP | |
| 1894 | DNA phosphorothioation-associated putative | |||
| 2192 | Uncharacterised protein | |||
| 2193 | M | M.SpiWPORF4504P (90% identity) | M.Sba10735ORF2193P | |
| 2194 | AIPR protein | |||
| 2547 | Uncharacterised protein | |||
| 2548 | M | M.SonORF3004P (69% identity) | M.Sba10735ORF2548P | |
| 2549 | Uncharacterised protein | |||
| 2549 | Uncharacterised protein | |||
| 2550 | M | M.Sba678ORF3523P (93% identity) | M.Sba10735ORF2550P | |
| 2551 | Uncharacterised protein | |||
| 3599 | Uncharacterised protein | |||
| 3600 | R | SbaM1ORF9470P (41% identity) | Sba10735ORF3601P | |
| 3601 | M | M.SbaM1ORF9465P (78% identity) | M.Sba10735ORF3601P | |
| 3602 | Uncharacterised protein | |||
| 3607 | Uncharacterised protein | |||
| 3608 | M | M.Sba678ORF3523P (99% identity) | M.Sba10735ORF3608P | |
| 3609 | Uncharacterised protein | |||
| 4640 | Uncharacterized protein conserved in bacteria | |||
| ??? | M | M.SbaOSORF4110P (99% identity) | GATC | M.Sba10735DamP |
| 4642 | Protein of uncharacterised function (DUF2970) | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3945 | D-malate degradation protein R | |||
| 3946 | R | Sba185ORF360P (97% identity) | Sba10735ORF3946P | |
| 3947 | mobile mystery protein B | |||