Salmonella enterica subsp. salamae NCTC9606 |
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Putative Salmonella enterica subsp. salamae NCTC9606 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,178,771 bp
GenBank #: UGYF00000000 (NZ_UGYF00000000)
REBASE acronym: Sen9606
Org_num: 42352
All begin NCTC9606_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 326 | TIR protein | |||
| 327 | M | M.Sen10718III (100% identity) | GCCANNNNNGTG | M.Sen9606II |
| 328 | S | S.Sen10718III (100% identity) | GCCANNNNNGTG | S.Sen9606II |
| 329 | membrane protein | |||
| 330 | R | Sen10718IIIP (100% identity) | GCCANNNNNGTG | Sen9606IIP |
| 331 | HNH nuclease | |||
| 358 | membrane protein | |||
| 360 | S | S.Sen1373ORF5145P (100% identity) | CGANNNNNNNNCTGC | S.Sen9606III |
| 361 | M | M.Sen10718IV (100% identity) | CGANNNNNNNNCTGC | M.Sen9606III |
| 362 | R | Sen10718IVP (100% identity) | CGANNNNNNNNCTGC | Sen9606IIIP |
| 363 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5196 | Uncharacterised protein | |||
| 5197 | M | M.Sen10718ORF4911P (100% identity) | M.Sen9606ORF5197P | |
| 5198 | cytoplasmic protein | |||
| 5060 | Adenine-specific methyltransferase | |||
| ??? | M | M.Sen10718ORF5200P (100% identity) | M.Sen9606ORF5061P | |
| 5062 | Uncharacterized protein yedK | |||
| 270 | Glycogen synthesis protein glgS | |||
| 271 | R | Sen10718ORF183P (100% identity) | Sen9606ORF271P | |
| 272 | restriction endonuclease | |||
| 330 | DEAD/DEAH box helicase | |||
| 331 | R | Sen10718ORF126P (100% identity) | Sen9606ORF331P | |
| 332 | Uncharacterised protein | |||
| 1085 | glycine-tRNA synthetase subunit beta | |||
| 1087 | M | M.Sen10718ORF1052P (100% identity) | M.Sen9606ORF1087P | |
| 1088 | Uncharacterised protein | |||
| 1320 | DamX protein | |||
| 1321 | M | M.SenSe29DamP (100% identity) | GATC | M.Sen9606Dam |
| 1322 | ribulose-phosphate 3-epimerase | |||
| 1426 | protein yhdU | |||
| 1427 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen9606IV |
| 1428 | Fis DNA-binding protein | |||
| 2415 | regulatory protein | |||
| 2416 | M | M.Sen10718ORF2318P (100% identity) | M.Sen9606ORF2416P | |
| 2417 | Uncharacterised protein | |||
| 2838 | metal-dependent phospho hydrolase | |||
| 2839 | M | M.Sen10718Dcm (100% identity) | CCWGG | M.Sen9606DcmP |
| 2840 | V | V.SenSe29DcmP (100% identity) | V.Sen9606DcmP | |
| 2841 | inner membrane transporter yedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4545 | cytoplasmic protein | |||
| 4546 | R | Sen10718IIP (100% identity) | CAGAG | Sen9606IP |
| 4547 | M | M.SenSe29ORF17380P (100% identity) | CAGAG | M.Sen9606I |
| 4548 | metabolite transport protein | |||