Salmonella enterica subsp. enterica serovar Typhimurium NCTC12023 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium NCTC12023 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,959,400 bp
GenBank #: UFRD00000000 (NZ_UFRD00000000)
REBASE acronym: Sen12023
Org_num: 42347
All begin NCTC12023_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3107 | restriction endonuclease | |||
| 3108 | R | StyUK1IIP (100% identity) | Sen12023ORF3108P | |
| 3109 | SAM-dependent methyltransferase | |||
| 3108 | type I restriction enzyme EcoKI subunit R | |||
| 3109 | M | M.StyUK1II (100% identity) | M.Sen12023ORF3109P | |
| 3110 | S | S.StyUK1II (14% identity) | S1.Sen12023ORF3109P | |
| 3111 | S | S1.Sen883ORF23840P (38% identity) | S2.Sen12023ORF3109P | |
| 3112 | S | S.StyUK1II (22% identity) | S3.Sen12023ORF3109P | |
| 3114 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9 | cytoplasmic protein | |||
| 10 | M | M.StyUK1ORFAP (100% identity) | M.Sen12023ORF10P | |
| 11 | cytoplasmic protein | |||
| 805 | phage protein | |||
| 806 | M | M.StyUK1V (100% identity) | GATC | M.Sen12023ORF806P |
| 807 | crossover junction endodeoxyribonuclease | |||
| 857 | metal-dependent phospho hydrolase | |||
| 858 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen12023DcmP |
| 859 | V | V.StyUK1DcmP (100% identity) | V.Sen12023DcmP | |
| 860 | inner membrane transporter yedA | |||
| 1725 | Eaa-like protein | |||
| 1726 | M | M.Sens29958ORF6205P (100% identity) | M.Sen12023ORF1726P | |
| 1727 | Ead-like protein | |||
| 3147 | DNA repair ATPase | |||
| 3148 | RM | StyUK1IV (100% identity) | GATCAG | Sen12023II |
| 3149 | spermidine/putrescine ABC transporter ATPase | |||
| 4228 | DamX protein | |||
| ??? | M | M.StyTDamP (100% identity) | GATC | M.Sen12023DamP |
| 4231 | Uncharacterised protein | |||
| 4338 | protein yhdU | |||
| 4339 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen12023III |
| 4340 | Fis DNA-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2643 | cytoplasmic protein | |||
| 2644 | R | StyUK1IP (99% identity) | CAGAG | Sen12023IP |
| 2645 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen12023I |
| 2646 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3106 | membrane protein | |||
| 3107 | R | StyUK1MrrP (100% identity) | Sen12023MrrP | |
| 3108 | type I restriction enzyme EcoKI subunit R | |||