Salmonella enterica subsp. enterica serovar Typhi NCTC779 |
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Putative Salmonella enterica subsp. enterica serovar Typhi NCTC779 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,482,129 bp
GenBank #: UAUN00000000 (NZ_UAUN00000000)
REBASE acronym: Sen779
Org_num: 42345
All begin NCTC779_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1268 | restriction endonuclease | |||
| 1269 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen779ORF1270P |
| 1270 | M | M.StyTORF4575P (88% identity) | GAANNNNNNNNTCGC | M.Sen779ORF1270P |
| 1271 | SAM-dependent methyltransferase | |||
| 1272 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen779ORF1270P |
| 1274 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3546 | bacteriophage protein | |||
| ??? | M | M.SenCEPR1ORF14095P (100% identity) | M.Sen779ORF3547P | |
| 3548 | bacteriophage protein | |||
| 3559 | 174 aa conserved hypothetical bacteriophage protein | |||
| 3560 | M | M.StyTORF1914P (100% identity) | M.Sen779ORF3560P | |
| 3561 | 190 aa hypothetical bacteriophage protein | |||
| 1299 | Uncharacterised protein | |||
| 1300 | R | Senst12ORF9665P (100% identity) | Sen779ORF1300P | |
| 1301 | Uncharacterised protein | |||
| 3993 | possible endonuclease | |||
| 3994 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen779ORF3994P |
| 3995 | C4-type zinc finger protein, DksA/TraR family | |||
| 1073 | DamX protein | |||
| 1074 | M | M.StyTDamP (100% identity) | GATC | M.Sen779DamP |
| 1075 | ribulose-phosphate 3-epimerase | |||
| 1175 | protein yhdU | |||
| 1176 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen779II |
| 1177 | Fis DNA-binding protein | |||
| 2964 | metal-dependent phospho hydrolase | |||
| 2965 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen779DcmP |
| 2966 | V | V.StyTDcmP (100% identity) | V.Sen779DcmP | |
| 2967 | inner membrane transporter yedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 265 | cytoplasmic protein | |||
| ??? | R | StyTORF2507P (100% identity) | CAGAG | Sen779IP |
| 268 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen779I |
| 269 | metabolite transport protein | |||
| 2948 | PilV-like protein | |||
| 2949 | R | StyTORF872P (100% identity) | CAAACC | Sen779IIIP |
| 2950 | M | M.SmaBWH35ORF16840P (100% identity) | CAAACC | M.Sen779III |
| 2951 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1267 | membrane protein | |||
| 1268 | R | StyTMrrP (100% identity) | Sen779MrrP | |
| 1269 | type I restriction enzyme EcoKI subunit R | |||