Salmonella enterica subsp. enterica serovar Dublin NCTC12710 |
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Putative Salmonella enterica subsp. enterica serovar Dublin NCTC12710 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,936,873 bp
GenBank #: UGYC00000000 (NZ_UGYC00000000)
REBASE acronym: Sen12710
Org_num: 42334
All begin NCTC12710_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4262 | restriction endonuclease | |||
| 4263 | M | M.StySBLI (100% identity) | M.Sen12710ORF4263P | |
| 4264 | S | S1.Ssp3CORF11555P (32% identity) | S1.Sen12710ORF4263P | |
| 4265 | S | S2.SenRM043ORF20535P (100% identity) | S2.Sen12710ORF4263P | |
| 4266 | R | Ssp3CORF11555P (100% identity) | Sen12710ORF4263P | |
| 4267 | transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 483 | DamX protein | |||
| 484 | M | M.StyTDamP (100% identity) | GATC | M.Sen12710DamP |
| 485 | ribulose-phosphate 3-epimerase | |||
| 583 | protein yhdU | |||
| 584 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen12710II |
| 585 | Fis DNA-binding protein | |||
| 1245 | C4-type zinc finger protein, DksA/TraR family | |||
| 1246 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.Sen12710III |
| 1247 | possible endonuclease | |||
| 1971 | Eaa protein | |||
| 1972 | M | M.Ssp3CORF22905P (100% identity) | M.Sen12710ORF1972P | |
| 1973 | EaD | |||
| 1987 | phage protein | |||
| ??? | M | M.Sen59898ORF9120P (100% identity) | M.Sen12710ORF1988P | |
| 1989 | crossover junction endodeoxyribonucleaseRusE | |||
| 2967 | inner membrane transporter yedA | |||
| 2968 | V | V.StyUK1DcmP (100% identity) | V.Sen12710DcmP | |
| 2969 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.Sen12710DcmP |
| 2970 | metal-dependent phospho hydrolase | |||
| 3130 | 190 aa hypothetical bacteriophage protein | |||
| 3131 | M | M.Ssp3CORF17125P (100% identity) | M.Sen12710ORF3131P | |
| 3132 | 174 aa conserved hypothetical bacteriophage protein | |||
| 4291 | Uncharacterised protein | |||
| ??? | R | SspSAL045ORF19515P (100% identity) | Sen12710ORF4292P | |
| 4294 | Insertion element IS476 uncharacterized 39.2 kDa | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3811 | cytoplasmic protein | |||
| 3812 | R | Ssp3CORF13760P (100% identity) | CAGAG | Sen12710IP |
| 3813 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen12710I |
| 3814 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4259 | Uncharacterised protein | |||
| ??? | R | SenSL913MrrP (100% identity) | Sen12710MrrP | |
| 4262 | restriction endonuclease | |||