Salmonella enterica subsp. enterica serovar Dublin NCTC12709 |
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Putative Salmonella enterica subsp. enterica serovar Dublin NCTC12709 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,933,380 bp
GenBank #: UGWY00000000 (NZ_UGWY00000000)
REBASE acronym: Sen12709
Org_num: 42333
All begin NCTC12709_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4203 | restriction endonuclease | |||
| 4204 | M | M.StySBLI (100% identity) | M.Sen12709ORF4204P | |
| 4205 | S | S1.Sen8012ORF18395P (32% identity) | S1.Sen12709ORF4204P | |
| 4206 | S | S2.SenRM043ORF20535P (100% identity) | S2.Sen12709ORF4204P | |
| 4207 | R | Ssp3CORF11555P (100% identity) | Sen12709ORF4204P | |
| 4208 | transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 372 | DamX protein | |||
| 373 | M | M.StyTDamP (100% identity) | GATC | M.Sen12709DamP |
| 374 | ribulose-phosphate 3-epimerase | |||
| 472 | protein yhdU | |||
| 473 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen12709III |
| 474 | Fis DNA-binding protein | |||
| 1138 | C4-type zinc finger protein, DksA/TraR family | |||
| 1139 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.Sen12709II |
| 1140 | possible endonuclease | |||
| 1880 | Eaa protein | |||
| 1881 | M | M.Ssp3CORF22905P (100% identity) | M.Sen12709ORF1881P | |
| 1882 | EaD | |||
| 1896 | phage protein | |||
| ??? | M | M.Sen59898ORF9120P (100% identity) | M.Sen12709ORF1897P | |
| 1898 | crossover junction endodeoxyribonucleaseRusE | |||
| 2891 | inner membrane transporter yedA | |||
| 2892 | V | V.StyUK1DcmP (100% identity) | V.Sen12709DcmP | |
| 2893 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.Sen12709DcmP |
| 2894 | metal-dependent phospho hydrolase | |||
| 3055 | 190 aa hypothetical bacteriophage protein | |||
| 3056 | M | M.Ssp3CORF17125P (100% identity) | M.Sen12709ORF3056P | |
| 3057 | 174 aa conserved hypothetical bacteriophage protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3744 | cytoplasmic protein | |||
| 3745 | R | Ssp3CORF13760P (100% identity) | CAGAG | Sen12709IP |
| 3746 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen12709I |
| 3747 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4200 | Uncharacterised protein | |||
| ??? | R | SenSL913MrrP (100% identity) | Sen12709MrrP | |
| 4203 | restriction endonuclease | |||