Salmonella enterica subsp. enterica NCTC6245 |
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Putative Salmonella enterica subsp. enterica NCTC6245 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,795,833 bp
GenBank #: UGXL00000000 (NZ_UGXL00000000)
REBASE acronym: Sen6245
Org_num: 42322
All begin NCTC6245_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4769 | membrane protein | |||
| ??? | R | Ssp6947IP (95% identity) | GAGNNNNNNNRTCC | Sen6245IIP |
| 4772 | M | M.Ssp6947I (100% identity) | GAGNNNNNNNRTCC | M.Sen6245II |
| 4773 | S | S1.Sen7102I (93% identity) | S1.Sen6245II | |
| 4774 | S | S.Ssp6947I (45% identity) | GAGNNNNNNNRTCC | S2.Sen6245II |
| 4775 | S | S.Ssp6947I (36% identity) | GAGNNNNNNNRTCC | S3.Sen6245II |
| 4777 | protein of uncharacterised function | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 48 | Uncharacterized protein yubE | |||
| 49 | M | M.SenWT5ORFDP (94% identity) | M.Sen6245ORF49P | |
| 50 | yfaB | |||
| 526 | DamX protein | |||
| ??? | M | M.Sen5798Dam (99% identity) | M.Sen6245DamP | |
| 528 | ribulose-phosphate 3-epimerase | |||
| 643 | protein yhdU | |||
| 644 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen6245ORF644P |
| 645 | Fis DNA-binding protein | |||
| 2312 | metal-dependent phospho hydrolase | |||
| ??? | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen6245DcmP |
| 2316 | V | V.Ssp6947DcmP (100% identity) | V.Sen6245DcmP | |
| 2317 | inner membrane transporter yedA | |||
| 4810 | Uncharacterised protein | |||
| 4811 | R | Ssp6947ORF4170P (100% identity) | Sen6245ORF4811P | |
| 4812 | Predicted transcriptional regulator | |||
| 4824 | prophage membrane protein | |||
| 4825 | R | Ssp6947ORF4185P (100% identity) | Sen6245ORF4826P | |
| 4826 | M | M.Ssp6947ORF4185P (100% identity) | M.Sen6245ORF4826P | |
| 4827 | integrase | |||
| 5365 | bacteriophage replication protein | |||
| 5366 | M | M.Sen8300ORF20620P (99% identity) | M.Sen6245ORF5366P | |
| 5367 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4222 | cytoplasmic protein | |||
| ??? | R | Ssp6947IIP (99% identity) | CAGAG | Sen6245IP |
| 4225 | M | M.Sen30ORF3610P (98% identity) | CAGAG | M.Sen6245I |
| 4226 | type III restriction-modification system StyLTI | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5367 | Uncharacterised protein | |||
| 5368 | M | M.Sen8300ORF20630P (100% identity) | M.Sen6245ORF5368P | |
| 5369 | endodeoxyribonuclease | |||