Salmonella enterica subsp. enterica serovar Virchow NCTC5742 |
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Putative Salmonella enterica subsp. enterica serovar Virchow NCTC5742 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,755,440 bp
GenBank #: UFQZ00000000 (NZ_UFQZ00000000)
REBASE acronym: Sen5742
Org_num: 42349
All begin NCTC5742_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4045 | membrane protein | |||
| 4046 | R | SenUA13ORF1281P (100% identity) | RAACNNNNNNNGTGG | Sen5742IIIP |
| 4047 | M | M.SenSL491ORF354P (100% identity) | RAACNNNNNNNGTGG | M.Sen5742III |
| 4048 | S | S.Sen10533ORF19305P (99% identity) | RAACNNNNNNNGTGG | S.Sen5742III |
| 4050 | protein of uncharacterised function | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 49 | Uncharacterized protein yubE | |||
| 50 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Sen5742ORF50P |
| 51 | yfaB | |||
| 459 | DamX protein | |||
| 460 | M | M.StyTDamP (100% identity) | GATC | M.Sen5742Dam |
| 461 | ribulose-phosphate 3-epimerase | |||
| 558 | protein yhdU | |||
| 559 | M | M.Sen895ORF165P (97% identity) | ATGCAT | M.Sen5742II |
| 560 | Fis DNA-binding protein | |||
| 835 | Uncharacterized protein y4aS | |||
| ??? | M | M.SenUA13ORF2340P (100% identity) | M.Sen5742ORF836P | |
| 838 | Uncharacterised protein | |||
| ??? | DNA mismatch endonuclease Vsr | |||
| 1908 | V | V.StyTDcmP (100% identity) | V.Sen5742DcmP | |
| 1909 | inner membrane transporter yedA | |||
| 4103 | 5-nucleotidase | |||
| 4104 | R | Sen10533ORF19585P (100% identity) | Sen5742ORF4104P | |
| 4105 | phage integrase family site-specific | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3593 | cytoplasmic protein | |||
| 3594 | R | SenZYXORFDP (99% identity) | CAGAG | Sen5742IP |
| 3595 | M | M.SenWT7II (100% identity) | CAGAG | M.Sen5742I |
| 3596 | metabolite transport protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1905 | metal-dependent phospho hydrolase | |||
| ??? | M | M.SenST01ORF6245P (99% identity) | CCWGG | M.Sen5742ORF1906P |
| 1908 | patch repair protein | |||