Salmonella enterica subsp. enterica NCTC5713 |
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Putative Salmonella enterica subsp. enterica NCTC5713 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,961,622 bp
GenBank #: UGXJ00000000 (NZ_UGXJ00000000)
REBASE acronym: Sen5713
Org_num: 42319
All begin NCTC5713_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4932 | restriction endonuclease | |||
| ??? | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen5713IIIP |
| ??? | M | M.StyUK1II (99% identity) | GAGNNNNNNRTAYG | M.Sen5713III |
| 4939 | S | S.Sen12116III (24% identity) | GAGNNNNNNRTAYG | S1.Sen5713III |
| 4940 | S | S.StyUK1II (53% identity) | GAGNNNNNNRTAYG | S2.Sen5713III |
| ??? | S | S.EcoC13452ORF4043P (16% identity) | S3.Sen5713IIIP | |
| 4942 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5784 | cytoplasmic protein | |||
| 5785 | M | M.StyUK1ORFAP (100% identity) | M.Sen5713ORF5785P | |
| 5786 | cytoplasmic protein | |||
| 461 | DamX protein | |||
| 462 | M | M.StyTDamP (100% identity) | GATC | M.Sen5713DamP |
| 463 | ribulose-phosphate 3-epimerase | |||
| 567 | protein yhdU | |||
| ??? | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen5713ORF568P |
| 570 | Fis DNA-binding protein | |||
| 1461 | 174 aa conserved hypothetical bacteriophage protein | |||
| 1462 | M | M.StyTORF1914P (100% identity) | M.Sen5713ORF1462P | |
| 1463 | Uncharacterised protein | |||
| 2292 | phage protein | |||
| 2293 | M | M.StyUK1V (100% identity) | GATC | M.Sen5713ORF2293P |
| 2294 | crossover junction endodeoxyribonuclease | |||
| 2341 | metal-dependent phospho hydrolase | |||
| 2342 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen5713DcmP |
| 2343 | V | V.StyUK1DcmP (100% identity) | V.Sen5713DcmP | |
| 2344 | inner membrane transporter yedA | |||
| 4973 | DNA repair ATPase | |||
| ??? | RM | StyUK1IV (99% identity) | GATCAG | Sen5713II |
| 4978 | spermidine/putrescine ABC transporter ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4340 | cytoplasmic protein | |||
| 4341 | R | StyUK1IP (99% identity) | CAGAG | Sen5713IP |
| 4342 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen5713I |
| 4343 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4931 | membrane protein | |||
| 4932 | R | StyUK1MrrP (100% identity) | Sen5713MrrP | |
| 4933 | type I restriction enzyme EcoKI subunit R | |||