Salmonella enterica subsp. enterica NCTC12416 |
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Putative Salmonella enterica subsp. enterica NCTC12416 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,971,333 bp
GenBank #: UGXP00000000 (NZ_UGXP00000000)
REBASE acronym: Sen12416
Org_num: 42317
All begin NCTC12416_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2329 | membrane protein | |||
| 2331 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen12416III |
| 2332 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen12416III |
| ??? | R | StyLT2IIP (99% identity) | GAGNNNNNNRTAYG | Sen12416IIIP |
| ??? | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 51 | cytoplasmic protein | |||
| 52 | M | M.StyUK1ORFAP (100% identity) | M.Sen12416ORF52P | |
| 53 | cytoplasmic protein | |||
| 237 | Bacteriophage replication gene A protein (GPA) | |||
| ??? | M | M.StyLTORF13745P (99% identity) | M.Sen12416ORF238P | |
| 239 | C4-type zinc finger protein, DksA/TraR family | |||
| 1001 | Fis DNA-binding protein | |||
| 1002 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen12416ORF1002P |
| 1003 | protein yhdU | |||
| 1115 | ribulose-phosphate 3-epimerase | |||
| ??? | M | M.Sen5798Dam (98% identity) | GATC | M.Sen12416Dam |
| 1118 | DamX protein | |||
| 2295 | spermidine/putrescine ABC transporter ATPase | |||
| 2296 | RM | StyUK1IV (100% identity) | GATCAG | Sen12416I |
| 2297 | DNA repair ATPase | |||
| 4759 | inner membrane transporter yedA | |||
| 4760 | V | V.StyUK1DcmP (100% identity) | V.Sen12416DcmP | |
| 4761 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen12416DcmP |
| 4762 | metal-dependent phospho hydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2838 | metabolite transport protein | |||
| 2839 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen12416II |
| ??? | R | StyUK1IP (99% identity) | CAGAG | Sen12416IIP |
| 2843 | terminal oxidase subunit I | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | Type I restriction enzyme EcoKI R protein HsdR | |||
| ??? | R | Sen1102MrrP (100% identity) | Sen12416MrrP | |
| 2337 | membrane protein | |||