Salmonella enterica NCTC9854 |
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Putative Salmonella enterica NCTC9854 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,804,513 bp
GenBank #: UGWI00000000 (NZ_UGWI00000000)
REBASE acronym: SenC9854
Org_num: 42301
All begin NCTC9854_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3831 | restriction endonuclease | |||
| 3832 | R | Sen9930ORF4295P (99% identity) | ACANNNNNNNNTCGG | SenC9854IIIP |
| 3833 | M | M.SenW714ORF20250P (99% identity) | ACANNNNNNNNTCGG | M.SenC9854III |
| 3834 | S | S.Sma13920I (61% identity) | ACANNNNNNNNTCGG | S.SenC9854III |
| 3836 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4564 | Uncharacterised protein | |||
| 4565 | M | M.Sen10081ORF50P (100% identity) | M.SenC9854ORF4565P | |
| 4566 | Uncharacterised protein | |||
| 347 | DamX protein | |||
| 348 | M | M.SenSe29DamP (100% identity) | GATC | M.SenC9854Dam |
| 349 | ribulose-phosphate 3-epimerase | |||
| 455 | protein yhdU | |||
| 456 | M | M.SenE42ORF2450P (100% identity) | ATGCAT | M.SenC9854II |
| 457 | Fis DNA-binding protein | |||
| 1183 | prophage protein | |||
| 1184 | M | M.Sen4840ORF2786P (100% identity) | M.SenC9854ORF1184P | |
| 1185 | prophage protein | |||
| 1806 | metal-dependent phospho hydrolase | |||
| 1807 | M | M.Sen9930DcmP (99% identity) | CCWGG | M.SenC9854DcmP |
| 1808 | V | V.SenSe29DcmP (99% identity) | V.SenC9854DcmP | |
| 1809 | inner membrane transporter yedA | |||
| 3861 | Uncharacterised protein | |||
| 3862 | R | SenSe29ORF19670P (99% identity) | SenC9854ORF3862P | |
| 3863 | metallothiol transferase FosB | |||
| 3883 | membrane protein | |||
| 3884 | R | Cwe616ORF4595P (100% identity) | SenC9854ORF3884P | |
| 3885 | Glycogen synthesis protein glgS | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3409 | cytoplasmic protein | |||
| 3410 | R | SenSe29ORF17380P (100% identity) | CAGAG | SenC9854IP |
| 3411 | M | M.SenSe29ORF17380P (99% identity) | CAGAG | M.SenC9854I |
| 3412 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3830 | GTPases (G3E family) | |||
| 3831 | R | SenSPBMrrP (99% identity) | SenC9854MrrP | |
| 3832 | type I restriction enzyme EcoKI subunit R | |||