Salmonella enterica NCTC8495 |
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Putative Salmonella enterica NCTC8495 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,813,239 bp
GenBank #: UGWL00000000 (NZ_UGWL00000000)
REBASE acronym: Sen8495
Org_num: 42298
All begin NCTC8495_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3986 | restriction endonuclease | |||
| 3987 | R | Sen78398ORF19770P (100% identity) | GACNNNNNNNTCGC | Sen8495IIIP |
| 3988 | M | M.Sen78398ORF19770P (100% identity) | GACNNNNNNNTCGC | M.Sen8495III |
| 3989 | S | S.Sen78398ORF19770P (100% identity) | GACNNNNNNNTCGC | S.Sen8495III |
| 3991 | membrane protein | |||
| 4031 | prophage protein | |||
| 4032 | R | Sen78398ORF19990P (100% identity) | CTANNNNNNCTGC | Sen8495IVP |
| 4033 | M | M.Sen78398ORF19990P (100% identity) | CTANNNNNNCTGC | M.Sen8495IV |
| 4034 | S | S.Sen78398ORF19990P (98% identity) | CTANNNNNNCTGC | S.Sen8495IV |
| 4035 | EA59 gene protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 405 | DamX protein | |||
| 406 | M | M.StyTDamP (100% identity) | GATC | M.Sen8495DamP |
| 407 | ribulose-phosphate 3-epimerase | |||
| 504 | protein yhdU | |||
| 505 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen8495I |
| 506 | Fis DNA-binding protein | |||
| 1194 | C4-type zinc finger protein, DksA/TraR family | |||
| 1195 | M | M.SenS334ORF5985P (100% identity) | GATC | M.Sen8495ORF1195P |
| 1196 | Bacteriophage replication gene A protein (GPA) | |||
| 1895 | metal-dependent phospho hydrolase | |||
| 1896 | M | M.SenWC81DcmP (100% identity) | CCWGG | M.Sen8495DcmP |
| 1897 | V | V.StyUK1DcmP (100% identity) | V.Sen8495DcmP | |
| 1898 | inner membrane transporter yedA | |||
| 4015 | Uncharacterised protein | |||
| 4016 | R | SenM4441ORF18165P (99% identity) | Sen8495ORF4016P | |
| 4017 | Uncharacterised protein | |||
| 4037 | 5-nucleotidase | |||
| 4038 | R | Sen78398ORF20015P (100% identity) | GAAC | Sen8495ORF4038P |
| 4039 | integrase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3549 | cytoplasmic protein | |||
| 3550 | R | SenHL21ORF17565P (100% identity) | CAGAG | Sen8495IIP |
| 3551 | M | M.SenST224ORF2660P (100% identity) | CAGAG | M.Sen8495II |
| 3552 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3985 | membrane protein | |||
| 3986 | R | StyTMrrP (100% identity) | Sen8495MrrP | |
| 3987 | type I restriction enzyme EcoKI subunit R | |||