Salmonella enterica NCTC8392 |
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Putative Salmonella enterica NCTC8392 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,905,698 bp
GenBank #: UGWS00000000 (NZ_UGWS00000000)
REBASE acronym: Sen8392
Org_num: 42297
All begin NCTC8392_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3991 | restriction endonuclease | |||
| 3992 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen8392IVP |
| 3993 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen8392IV |
| 3994 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen8392IV |
| 3996 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4756 | cytoplasmic protein | |||
| 4757 | M | M.StyUK1ORFAP (100% identity) | M.Sen8392ORF4757P | |
| 4758 | cytoplasmic protein | |||
| 366 | DamX protein | |||
| 367 | M | M.StyTDamP (100% identity) | GATC | M.Sen8392DamP |
| 368 | ribulose-phosphate 3-epimerase | |||
| 467 | protein yhdU | |||
| 468 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen8392III |
| 469 | Fis DNA-binding protein | |||
| 1157 | gp91 | |||
| 1158 | M | M.SenC618ORF1130P (100% identity) | M.Sen8392ORF1158P | |
| 1159 | Bacteriophage replication gene A protein (GPA) | |||
| 1266 | 174 aa conserved hypothetical bacteriophage protein | |||
| 1267 | M | M.StyTORF1914P (100% identity) | M.Sen8392ORF1267P | |
| 1268 | Uncharacterised protein | |||
| 1920 | metal-dependent phospho hydrolase | |||
| 1921 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen8392Dcm |
| 1922 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen8392DcmP |
| 1923 | inner membrane transporter yedA | |||
| 4026 | DNA repair ATPase | |||
| 4027 | RM | StyUK1IV (100% identity) | GATCAG | Sen8392II |
| 4028 | spermidine/putrescine ABC transporter ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3547 | cytoplasmic protein | |||
| 3548 | R | StyUK1IP (99% identity) | CAGAG | Sen8392IP |
| 3549 | M | M.Sens29958ORF17880P (100% identity) | CAGAG | M.Sen8392I |
| 3550 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3990 | membrane protein | |||
| 3991 | R | StyUK1MrrP (100% identity) | Sen8392MrrP | |
| 3992 | type I restriction enzyme EcoKI subunit R | |||