Salmonella enterica NCTC10056 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica NCTC10056 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,960,082 bp
GenBank #: UGWO00000000 (NZ_UGWO00000000)
REBASE acronym: Sen10056
Org_num: 42274
All begin NCTC10056_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4181 | restriction endonuclease | |||
| 4182 | R | SenSARC10ORF10380P (98% identity) | GGHANNNNNNNNGTGC | Sen10056IIIP |
| 4183 | M | M.SenSL491ORF354P (98% identity) | GGHANNNNNNNNGTGC | M.Sen10056III |
| 4184 | S | S.KpnLH09dORF22205P (70% identity) | GGHANNNNNNNNGTGC | S.Sen10056III |
| 4186 | cytoplasmic protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 42 | cytoplasmic protein | |||
| 43 | M | M.Sen552ORF23300P (99% identity) | M.Sen10056ORF43P | |
| 44 | Uncharacterized protein yubE | |||
| 561 | DamX protein | |||
| 562 | M | M.SenSARC10DamP (100% identity) | GATC | M.Sen10056DamP |
| 563 | ribulose-phosphate 3-epimerase | |||
| 661 | protein yhdU | |||
| 662 | M | M.SenSARC10ORF5070P (100% identity) | ATGCAT | M.Sen10056II |
| 663 | Fis DNA-binding protein | |||
| 1380 | DNA methyl transferase | |||
| 1381 | M | M.Sen2485ORF15795P (93% identity) | M.Sen10056ORF1381P | |
| 1384 | bacteriophage replication protein | |||
| 2004 | Domain of uncharacterised function DUF87 | |||
| 2005 | M | M.Sensp14178ORF9330P (99% identity) | M.Sen10056ORF2005P | |
| 2006 | integrase | |||
| 2034 | metal-dependent phospho hydrolase | |||
| 2035 | M | M.SenSARC10DcmP (100% identity) | CCWGG | M.Sen10056DcmP |
| 2036 | V | V.SenSARC10DcmP (100% identity) | V.Sen10056DcmP | |
| 2037 | inner membrane transporter yedA | |||
| 3208 | Uncharacterised protein | |||
| 3209 | M | M.CyoL6ORF16030P (99% identity) | M.Sen10056ORF3209P | |
| 3210 | bacteriophage protein | |||
| 3288 | Uncharacterised protein | |||
| 3289 | M | M.Sen24587ORF14445P (94% identity) | M.Sen10056ORF3289P | |
| 3290 | phage lysozyme lysis protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3801 | cytoplasmic protein | |||
| 3802 | R | Sen868ORFBP (99% identity) | CAGAG | Sen10056IP |
| 3803 | M | M.Sen868ORFBP (100% identity) | CAGAG | M.Sen10056I |
| 3804 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4180 | Uncharacterised protein | |||
| 4181 | R | SenSARC10MrrP (99% identity) | Sen10056MrrP | |
| 4182 | type I restriction enzyme EcoEI R protein | |||