Pseudomonas aeruginosa NCTC13719 |
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Putative Pseudomonas aeruginosa NCTC13719 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 7,028,349 bp
GenBank #: UGUM00000000 (NZ_UGUM00000000)
REBASE acronym: Pae13719
Org_num: 42230
All begin NCTC13719_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 209 | metal-dependent hydrolase | |||
| 210 | R | Ssp0042ORF670P (100% identity) | TCCANNNNNNCGT | Pae13719IIIP |
| 211 | VWA domain protein interacting with AAA ATPase | |||
| 212 | ATPase | |||
| 213 | Uncharacterised protein | |||
| 214 | DNA-binding protein | |||
| 215 | Uncharacterised protein | |||
| 216 | S | S.PmoB5ORF1050P (100% identity) | TCCANNNNNNCGT | S.Pae13719III |
| 217 | M | M.PmoB5ORF1050P (100% identity) | TCCANNNNNNCGT | M.Pae13719III |
| 218 | type I restriction-modification system subunit | |||
| 6208 | phage integrase family site specific | |||
| 6209 | M | M.Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | M.Pae13719II |
| 6210 | S | S.Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | S.Pae13719II |
| 6211 | R | Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | Pae13719IIP |
| 6212 | transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 67 | recombination associated protein | |||
| 68 | M | M.Pae13437ORF1200P (100% identity) | M.Pae13719ORF68P | |
| 69 | Uncharacterised protein | |||
| 4919 | nucleoid-associated protein NdpA | |||
| 4920 | M | M.Paes32ORF1382P (100% identity) | M.Pae13719ORF4920P | |
| 4921 | DNA binding protein | |||
| 6121 | DNA gyrase subunit B | |||
| 6122 | RM | Paes32ORF5P (100% identity) | GATCGAG | Pae13719I |
| 6123 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2351 | AIPR protein | |||
| ??? | M | M.Paes32ORF4058P (100% identity) | CACACC | M.Pae13719IV |
| 2353 | R | Paes32ORF4058P (100% identity) | CACACC | Pae13719IVP |
| 2354 | insertion sequence IS407 OrfB | |||