Pasteurella testudinis NCTC12150 |
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Putative Pasteurella testudinis NCTC12150 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 3,029,577 bp
GenBank #: UGSY00000000 (NZ_UGSY00000000)
REBASE acronym: Pte12150
Org_num: 41610
All begin NCTC12150_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 30 | Uncharacterised protein | |||
| 31 | R | Nba26BORF11890P (79% identity) | GGAGNNNNNNRTG | Pte12150IIP |
| 32 | Uncharacterised protein | |||
| 33 | Protein of uncharacterised function (DUF3800) | |||
| 34 | S | S.Ain201ORF13230P (43% identity) | GGAGNNNNNNRTG | S.Pte12150II |
| 35 | Virulence protein | |||
| 36 | M | M.Nba26BORF11890P (86% identity) | GGAGNNNNNNRTG | M.Pte12150II |
| 37 | Type I restriction modification DNA specificity | |||
| 424 | Uncharacterised protein | |||
| 425 | R | Awo1030IIIP (71% identity) | GAANNNNNNGGT | Pte12150IP |
| 426 | Virulence protein | |||
| 427 | Virulence protein | |||
| 428 | S | S1.Hpa1199ORF1275P (46% identity) | GAANNNNNNGGT | S1.Pte12150I |
| 429 | M | M.Usu17474ORF8335P (84% identity) | GAANNNNNNGGT | M.Pte12150I |
| 430 | S | S.Bco4098ORF1713P (28% identity) | S2.Pte12150IP | |
| 431 | S | S1.Msp820ORF9360P (23% identity) | S3.Pte12150IP | |
| 432 | site-specific tyrosine recombinase XerC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 616 | Uncharacterised protein | |||
| 617 | R | VspF64ORF5875P (38% identity) | Pte12150ORF618P | |
| 618 | M | M.Abe554ORFCP (59% identity) | M.Pte12150ORF618P | |
| 619 | iron(III) transport system substrate-binding | |||
| 1461 | KilA domain-containing protein | |||
| 1463 | M | M.Hin8883ORF5485P (34% identity) | M.Pte12150ORF1463P | |
| 1464 | Uncharacterised protein | |||
| 2134 | Uncharacterised protein | |||
| ??? | M | M.MhaA2ORF1241P (28% identity) | M.Pte12150ORF2136P | |
| 2137 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1228 | ORF6N domain | |||
| 1229 | M | M.Msp1224ORF7005P (32% identity) | M.Pte12150ORF1229P | |
| 1230 | Uncharacterised protein | |||
| 1231 | R | Bta27643ORF7375P (54% identity) | Pte12150ORF1229P | |
| 1232 | chromosome segregation protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 988 | Protein of uncharacterised function (DUF721) | |||
| 989 | M | M.Cor1662TORF9805P (71% identity) | M.Pte12150ORF989P | |
| 990 | 3-dehydroquinate synthase | |||
| 1484 | Replication protein P | |||
| 1485 | M | M.Aap248ORF7475P (64% identity) | M.Pte12150ORF1485P | |
| 1486 | Protein of uncharacterised function (DUF1367) | |||