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Putative Helicobacter muridarum NCTC12714 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,263,336 bp
GenBank #: UGJE00000000 (NZ_UGJE00000000)
REBASE acronym: Hmu12714
Org_num: 43565
All begin NCTC12714_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1621 | Uncharacterised protein | |||
1622 | M | M.HmuST1ORF4245P (100% identity) | M.Hmu12714ORF1622P | |
1623 | Protein of uncharacterised function (DUF3800) | |||
1624 | Uncharacterised protein | |||
1625 | S | S.HmuST1ORF4245P (96% identity) | S1.Hmu12714ORF1622P | |
1626 | S | S.HmuST1ORF1000P (84% identity) | S2.Hmu12714ORF1622P | |
1627 | modulator of drug activity MdaB | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
??? | M | M.HmuST1ORF3200P (91% identity) | M.Hmu12714ORF1P | |
??? | R | Hmu12714ORF725P (100% identity) | Hmu12714ORF1P | |
4 | adenine-specific DNA methylase | |||
5 | Uncharacterised protein | |||
??? | M | M.Hmu12714ORF719P (93% identity) | M.Hmu12714ORF6P | |
9 | adenine-specific DNA methylase | |||
9 | adenine-specific DNA methylase | |||
??? | M | M.Hmu12714ORF718P (92% identity) | M.Hmu12714ORF10P | |
12 | DNA modification methyltransferase | |||
16 | Uncharacterised protein | |||
??? | R | HmuST1ORF3200P (54% identity) | Hmu12714ORF19P | |
??? | M | M.HmuST1ORF3200P (59% identity) | M.Hmu12714ORF19P | |
451 | Uncharacterised protein | |||
452 | M | M.HmuST1ORF3685P (91% identity) | M.Hmu12714ORF452P | |
453 | gluconolactonase | |||
717 | metallo-beta-lactamase family protein | |||
718 | M | M.HmuST1ORF3175P (97% identity) | M.Hmu12714ORF718P | |
719 | DNA modification methyltransferase | |||
718 | adenine-specific DNA methylase | |||
??? | M | M.Hsp6451ORF5965P (85% identity) | M.Hmu12714ORF719P | |
721 | Uncharacterised protein | |||
723 | adenine-specific DNA methylase | |||
??? | R | Hmu12714ORF1P (100% identity) | Hmu12714ORF725P | |
725 | M | M.HmuST1ORF3200P (100% identity) | M.Hmu12714ORF725P | |
726 | adenine specific DNA methyltransferase | |||
725 | Type II modification enzyme | |||
??? | M | M.HmuST1ORF3205P (98% identity) | CCGG | M.Hmu12714V |
728 | R | HmuST1ORF3205P (100% identity) | CCGG | Hmu12714VP |
729 | methyltransferase | |||
728 | endonuclease MjaVIP | |||
729 | M | M.HmuST1ORF3180P (100% identity) | M.Hmu12714ORF729P | |
730 | R | HmuST1ORF3180P (100% identity) | Hmu12714ORF729P | |
731 | adenylosuccinate lyase | |||
731 | adenylosuccinate lyase | |||
732 | M | M.HmuST1ORF3230P (100% identity) | GATATC | M.Hmu12714III |
??? | R | HmuST1ORF3230P (100% identity) | GATATC | Hmu12714IIIP |
734 | adenylosuccinate lyase | |||
734 | adenylosuccinate lyase | |||
735 | M | M.HmuST1ORF3245P (38% identity) | M.Hmu12714ORF735P | |
736 | molybdenum cofactor biosynthesis protein A | |||
1111 | 2-aminoethylphosphonate ABC transporter | |||
1112 | M | M1.HmuST1ORF8940P (100% identity) | M1.Hmu12714ORF1112P | |
1113 | R | HmuST1ORF8940P (86% identity) | Hmu12714ORF1112P | |
??? | M | M2.HmuST1ORF8940P (99% identity) | M2.Hmu12714ORF1112P | |
1116 | Type I restriction-modification system | |||
1116 | Type I restriction-modification system | |||
1117 | M | M.HmuST1ORF8960P (94% identity) | M.Hmu12714ORF1117P | |
1118 | site-specific type II DNA methyltransferase | |||
1117 | type II DNA modification enzyme | |||
1118 | M | M.Hsp1616ORF1245P (92% identity) | M.Hmu12714ORF1118P | |
1119 | R | HmuST1ORF6080P (87% identity) | Hmu12714ORF1118P | |
1120 | ABC-type sugar transport system, periplasmic | |||
1120 | ABC-type sugar transport system, periplasmic | |||
1121 | R | Hsp6451ORF8740P (50% identity) | Hmu12714ORF1125P | |
1122 | type II restriction endonuclease TdeIII | |||
1123 | Modification methylase BamHI | |||
1124 | Uncharacterised protein | |||
1125 | M | M.HmuST1ORF6105P (97% identity) | M.Hmu12714ORF1125P | |
1126 | guanosine monophosphate synthetase GuaA | |||
1122 | type II restriction endonuclease TdeIII | |||
1123 | M | M.HmuST1ORF6095P (100% identity) | M.Hmu12714ORF1123P | |
1124 | Uncharacterised protein | |||
1126 | guanosine monophosphate synthetase GuaA | |||
??? | R | HmuST1ORF6115P (100% identity) | CCNNGG | Hmu12714IVP |
1129 | M | M.HmuST1ORF6115P (100% identity) | CCNNGG | M.Hmu12714IV |
1130 | GMP synthase | |||
1157 | type III restriction-modification system | |||
??? | M | M.HmuST1ORF2160P (92% identity) | M.Hmu12714ORF1158P | |
1160 | adenine specific DNA methyltransferase | |||
1159 | Type II adenine specific DNA methyltransferase | |||
1160 | RM | HmuST1ORF2160P (83% identity) | Hmu12714ORF1160P | |
1161 | adenine specific DNA methyltransferase | |||
1638 | multidrug-efflux protein | |||
??? | RM | HmuST1ORF6595P (100% identity) | Hmu12714ORF1639P | |
1641 | S | S.HmuST1ORF6595P (86% identity) | S1.Hmu12714ORF1639P | |
1642 | S | S2.HbiMUORF9990P (51% identity) | S2.Hmu12714ORF1639P | |
1643 | nodulation protein L | |||
1650 | modulator of drug activity MdaB | |||
??? | RM | HmuST1ORF475P (100% identity) | Hmu12714ORF1651P | |
1653 | aminoalkylphosphonic acid N-acetyltransferase | |||
1659 | MerR family transcription regulator | |||
1660 | M | M.HmuST1ORF4235P (100% identity) | GCATC | M1.Hmu12714II |
1661 | M | M.HmuST1ORF4230P (100% identity) | GCATC | M2.Hmu12714II |
1662 | R | HhiYS1ORFQP (65% identity) | GCATC | Hmu12714IIP |
1663 | Uncharacterised protein | |||
1674 | Uncharacterised protein | |||
1675 | M | M.HmuST1ORF4170P (100% identity) | CGCG | M.Hmu12714VI |
1676 | oxidoreductase, aldo/keto reductase family | |||
1691 | CAAX protease | |||
1693 | RM | HmuST1ORF4975P (97% identity) | Hmu12714ORF1693P | |
1694 | Type IIG restriction-modification enzyme | |||
1697 | Uncharacterised protein | |||
1698 | R | HmuST1ORF5370P (100% identity) | Hmu12714ORF1699P | |
1699 | M | M.HmuST1ORF5365P (69% identity) | M.Hmu12714ORF1699P | |
1700 | adenine specific DNA methyltransferase | |||
1697 | Uncharacterised protein | |||
1698 | R | HmuST1ORF5370P (100% identity) | Hmu12714ORF1698P | |
1699 | DNA methyltransferase C1 | |||
1699 | DNA methyltransferase C1 | |||
1700 | M | M.HhiYS1ORFC1P (84% identity) | M.Hmu12714ORF1700P | |
1701 | Uncharacterized conserved protein | |||
1708 | Uncharacterised protein | |||
1709 | RM | HmuST1ORF7035P (66% identity) | Hmu12714ORF1709P | |
1710 | 4-carboxymuconolactone decarboxylase | |||
1713 | Uncharacterised protein | |||
1714 | R | HmuST1ORF7005P (100% identity) | GAAGA | Hmu12714IP |
1715 | M | M2.HmuST1ORF7005P (100% identity) | GAAGA | M1.Hmu12714I |
1716 | Uncharacterised protein | |||
1717 | M | M1.HmuST1ORF7005P (100% identity) | GAAGA | M2.Hmu12714I |
1718 | cell division protein FtsK | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
244 | saccharopine dehydrogenase | |||
245 | R | HmuST1ORF3055P (100% identity) | Hmu12714ORF246P | |
246 | M | M2.HmuST1ORF3055P (100% identity) | M.Hmu12714ORF246P | |
247 | modification methylase | |||
1295 | para-aminobenzoate synthase glutamine | |||
1296 | M | M1.HmuST1ORF3055P (90% identity) | M.Hmu12714ORF1296P | |
1297 | inner membrane protein | |||
1631 | aldo/keto reductase | |||
??? | R | HmuST1ORF6565P (57% identity) | Hmu12714ORF1634P | |
1634 | M | M.HmuST1ORF6565P (82% identity) | M.Hmu12714ORF1634P | |
1635 | Alkyl hydroperoxide reductase, large subunit |