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Putative Helicobacter fennelliae NCTC13101 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 2,158,551 bp
GenBank #: UGID00000000 (NZ_UGID00000000)
REBASE acronym: Hfe13101
Org_num: 43563
All begin NCTC13101_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
972 | GIY-YIG nuclease superfamily protein | |||
973 | S | S.Hbi43879ORF1780P (64% identity) | S1.Hfe13101ORF977P | |
974 | Uncharacterized protein conserved in bacteria | |||
??? | R | HbiAAQJHORF8670P (60% identity) | Hfe13101ORF977P | |
??? | M | M.HciP01DORFHP (98% identity) | M.Hfe13101ORF977P | |
979 | CAAX protease | |||
980 | S | S.Hfe13102V (62% identity) | S2.Hfe13101ORF977P | |
981 | cation diffusion facilitator family transporter | |||
1997 | saccharopine dehydrogenase | |||
1998 | M | M.Hfe13102ORF1993P (99% identity) | M.Hfe13101ORF1998P | |
1999 | Fic family protein | |||
2000 | Uncharacterised protein | |||
2001 | Uncharacterised protein | |||
2002 | S | S.Hfe50ORF996P (36% identity) | S.Hfe13101ORF1998P | |
2003 | thiamine biosynthesis protein (thi) | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
86 | oxidoreductase, aldo/keto reductase family | |||
87 | M | M.Hfe50ORF2137P (100% identity) | GCATC | M.Hfe13101VI |
88 | Uncharacterised protein | |||
89 | R | Hfe11613IP (60% identity) | GCATC | Hfe13101VIP |
90 | type II methylase | |||
86 | oxidoreductase, aldo/keto reductase family | |||
87 | Adenine-specific methyltransferase | |||
89 | AlwI restriction endonuclease family protein | |||
90 | M | M.Hfe50ORF2139P (100% identity) | M.Hfe13101ORF90P | |
91 | nodulation protein L | |||
105 | NADP-dependent L-serine/L-allo-threonine | |||
106 | R | Hfe13102IP (100% identity) | GGATG | Hfe13101VP |
107 | M | M.Hfe50ORF2159P (99% identity) | GGATG | M1.Hfe13101V |
108 | M | M2.Hfe13102I (99% identity) | GGATG | M2.Hfe13101V |
109 | Uncharacterised protein | |||
111 | Phosphoglycolate phosphatase | |||
112 | M | M.Hfe13102ORF143P (100% identity) | M.Hfe13101ORF112P | |
??? | R | Hfe13102ORF143P (80% identity) | Hfe13101ORF112P | |
114 | SAM-dependent methyltransferase | |||
563 | Uncharacterised protein | |||
565 | M | M.Hsp6451ORF9990P (55% identity) | CATG | M.Hfe13101I |
566 | Uncharacterised protein | |||
919 | Type II adenine specific DNA methyltransferase | |||
920 | M | M.OspMM50ORF6980P (56% identity) | M.Hfe13101ORF920P | |
921 | R | CbaCHKC6ORF1085P (33% identity) | Hfe13101ORF920P | |
922 | Uncharacterised protein | |||
1153 | Uncharacterised protein | |||
1154 | R | Hfe13102ORF825P (97% identity) | GTSAC | Hfe13101VIIP |
1155 | M | M.Hci629ORFEP (99% identity) | GTSAC | M.Hfe13101VII |
1156 | Uncharacterised protein | |||
1238 | acyltransferase | |||
1239 | M | M.Hfe13102ORF766P (99% identity) | M.Hfe13101ORF1239P | |
1240 | type II DNA modification enzyme | |||
1240 | type II DNA modification enzyme | |||
1241 | R | HciT36ORF884P (95% identity) | GGNCC | Hfe13101IIIP |
1242 | M | M.Hfe13102ORF764P (99% identity) | GGNCC | M.Hfe13101III |
1243 | GMP synthase | |||
1859 | Uncharacterised protein | |||
1860 | M | M.Hfe50ORF1575P (100% identity) | M.Hfe13101ORF1860P | |
1861 | Uncharacterised protein | |||
1873 | Protein involved in cell division | |||
1874 | M | M.Hfe13102II (99% identity) | GTNNAC | M.Hfe13101IV |
1875 | R | Hfe13102IIP (100% identity) | GTNNAC | Hfe13101IVP |
1876 | phage-related CUP0950-like protein | |||
1978 | Uncharacterized protein conserved in archaea | |||
1979 | RM | Hfe50ORF975P (18% identity) | Hfe13101ORF1979AP | |
1980 | RM | Hfe50ORF975P (80% identity) | Hfe13101ORF1979BP | |
1981 | Integral membrane protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
718 | Uncharacterised protein | |||
??? | M | M.Hfe13102ORF1258P (98% identity) | M.Hfe13101ORF719P | |
721 | R | Hci611ORFCP (96% identity) | Hfe13101ORF719P | |
722 | Uncharacterised protein | |||
1623 | Oleate hydratase | |||
1624 | R | Hfe13102ORF1625P (100% identity) | Hfe13101ORF1625P | |
??? | M | M.Hfe13102ORF1625P (96% identity) | M.Hfe13101ORF1625P | |
1627 | 4-oxalocrotonate tautomerase enzyme family | |||
1786 | Uncharacterized conserved protein | |||
1787 | M | M.Hfe13102ORF1785P (98% identity) | M.Hfe13101ORF1787P | |
1788 | Predicted transcriptional regulator |