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Putative Escherichia coli NCTC9775 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,718,274 bp
GenBank #: UFZP00000000 (NZ_UFZP00000000)
REBASE acronym: EcoC9775
Org_num: 43864
All begin NCTC9775_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2570 | restriction endonuclease | |||
??? | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoC9775I |
2573 | S | S.Ecop4AORF21290P (83% identity) | RTACNNNNGTG | S1.EcoC9775I |
2574 | S | S.Ecos9ORF22265P (9% identity) | RTACNNNNGTG | S2.EcoC9775I |
2575 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoC9775IP |
2577 | protein YjiS | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
125 | ISShdy1, transposase | |||
126 | M | M.Sso3885ORF23215P (100% identity) | SAY | M.EcoC9775ORF126P |
127 | cytoplasmic protein | |||
4461 | cytoplasmic protein | |||
4462 | M | M.Sso866ORF27155P (100% identity) | M.EcoC9775ORF4462P | |
4463 | YfdA | |||
440 | lipoprotein | |||
441 | M | M.EcoSCU103ORF9720P (95% identity) | M.EcoC9775ORF441P | |
447 | phage protein | |||
5011 | TraR/DksA family transcriptional regulator | |||
5012 | M | M.EcoBP231ORF14695P (99% identity) | GATC | M.EcoC9775ORF5012P |
5013 | replication protein for prophage | |||
1260 | DMT superfamily transporter inner | |||
1261 | V | V.SflC32DcmP (74% identity) | V.EcoC9775DcmP | |
1262 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoC9775DcmP |
1263 | phosphohydrolase | |||
2639 | 5-methylcytosine restriction system component | |||
2640 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC9775IIP |
2641 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC9775II |
2642 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoC9775II |
2643 | transposase | |||
3238 | phage capsid protein | |||
3239 | R | Eho218ORF15P (100% identity) | EcoC9775ORF3240P | |
3240 | M | M.SflFF22ORF10P (100% identity) | M.EcoC9775ORF3240P | |
3241 | Replication gene A protein (GpA) | |||
3935 | DamX protein | |||
3936 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC9775DamP |
3937 | ribulose-phosphate 3-epimerase | |||
4044 | membrane protein | |||
??? | M | M.EspP079ORF3959P (99% identity) | ATGCAT | M.EcoC9775ORF4045P |
4047 | DNA-binding protein Fis | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
2637 | glycosyltransferase | |||
2638 | R | EcosS3McrBP (100% identity) | EcoC9775McrBP | |
2639 | R | EcosS9McrCP (100% identity) | EcoC9775McrCP | |
2640 | restriction endonuclease |