Escherichia coli NCTC9705 |
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Putative Escherichia coli NCTC9705 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,008,272 bp
GenBank #: UGFB00000000 (NZ_UGFB00000000)
REBASE acronym: EcoC9705
Org_num: 43860
All begin NCTC9705_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4223 | Uncharacterised protein | |||
| 4224 | R | EcoSCU171ORF17935P (100% identity) | RTCANNNNNNNNRTRTC | EcoC9705IP |
| 4225 | M | M.Sdy49345I (97% identity) | RTCANNNNNNNNRTRTC | M.EcoC9705I |
| 4226 | S | S.EcoSCU171ORF17935P (100% identity) | RTCANNNNNNNNRTRTC | S.EcoC9705I |
| 4228 | Uncharacterized conserved protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 138 | cytoplasmic protein | |||
| 139 | M | M.Sen527ORF25750P (100% identity) | M.EcoC9705ORF139P | |
| 140 | plasmid segregation protein | |||
| 272 | cytoplasmic protein | |||
| 273 | M | M.UbapRSB107ORFAP (99% identity) | SAY | M.EcoC9705ORF273P |
| 274 | YfdA | |||
| 686 | DamX protein | |||
| 687 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC9705DamP |
| 688 | ribulose-phosphate 3-epimerase | |||
| 807 | membrane protein | |||
| 808 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoC9705ORF808P |
| 809 | DNA-binding protein Fis | |||
| 2164 | phosphohydrolase | |||
| 2165 | M | M.EcoS792DcmP (100% identity) | CCWGG | M.EcoC9705DcmP |
| 2166 | V | V.SflC32DcmP (74% identity) | V.EcoC9705DcmP | |
| 2167 | DMT superfamily transporter inner | |||
| 4266 | endonuclease | |||
| 4267 | R | SflFF17ORF19275P (100% identity) | EcoC9705ORF4267P | |
| 4268 | Uncharacterised protein | |||
| 4294 | Predicted ATPase | |||
| 4295 | RM | EcoSCU171ORF17610P (100% identity) | EcoC9705ORF4295P | |
| 4296 | ATPase-like protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3010 | isocitrate dehydrogenase | |||
| 3011 | R | EcoSW4848GmrSD2P (100% identity) | EcoC9705GmrSDP | |
| 3012 | pinE invertase/site-specific DNA | |||
| 4226 | type I restriction-modification enzyme S | |||
| 4228 | R | Eco442GmrSDP (100% identity) | EcoC9705GmrD2P | |
| 4229 | protein YjiS | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 46 | Uncharacterised protein | |||
| 47 | M | M.Sso524ORF460P (100% identity) | M.EcoC9705ORF47P | |
| 48 | Uncharacterised protein | |||