Escherichia coli NCTC9119 |
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Putative Escherichia coli NCTC9119 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,496,237 bp
GenBank #: UGGG00000000 (NZ_UGGG00000000)
REBASE acronym: EcoC9119
Org_num: 43853
All begin NCTC9119_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1032 | ATP-dependent helicase | |||
| 1033 | R | EmaC12ORF18910P (100% identity) | GAACNNNNNTGC | EcoC9119IIP |
| 1034 | M | M.Sen6640ORF2690P (100% identity) | GAACNNNNNTGC | M.EcoC9119II |
| 1035 | S | S.SflN101ORF19075P (100% identity) | GAACNNNNNTGC | S.EcoC9119II |
| 1036 | Uncharacterised protein | |||
| 3201 | IS911 orfA | |||
| 3202 | R | EcoLR31ORF17520P (100% identity) | AGTNNNNNNCTC | EcoC9119IP |
| 3203 | Uncharacterised protein | |||
| 3204 | S | S.EcoLR31ORF17520P (100% identity) | AGTNNNNNNCTC | S.EcoC9119I |
| 3205 | M | M.EcoLR31ORF17520P (100% identity) | AGTNNNNNNCTC | M.EcoC9119I |
| 3206 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 461 | DamX protein | |||
| 462 | M | M.EcoSCU316DamP (100% identity) | GATC | M.EcoC9119DamP |
| 463 | ribulose-phosphate 3-epimerase | |||
| 566 | membrane protein | |||
| 567 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.EcoC9119ORF567P |
| 568 | DNA-binding protein Fis | |||
| 921 | restriction methylase | |||
| ??? | R | KpnPR04ORFGP (98% identity) | EcoC9119ORF922P | |
| 924 | endonuclease | |||
| 1427 | Uncharacterised protein | |||
| 1428 | R | EcoS22ECORF14420P (100% identity) | EcoC9119ORF1429P | |
| 1429 | M | M.EcoT040ORF14860P (97% identity) | M.EcoC9119ORF1429P | |
| 1430 | integrase | |||
| 2174 | phosphohydrolase | |||
| 2175 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoC9119DcmP |
| 2176 | V | V.SsoST152DcmP (100% identity) | V.EcoC9119DcmP | |
| 2177 | DMT superfamily transporter inner | |||
| 3835 | phage protein | |||
| 3836 | M | M.Sbo812ORFAP (99% identity) | M.EcoC9119ORF3836P | |
| 3837 | ybl17 | |||
| 4534 | RM | Fnu048ORFEP (100% identity) | EcoC9119ORF4534P | |
| 4535 | helicase domain-containing protein | |||
| 4541 | N-acetylneuraminate epimerase 2 | |||
| 4542 | R | EcoRG065ORF11765P (100% identity) | EcoC9119ORF4542P | |
| 4543 | Uncharacterised protein | |||