Escherichia coli NCTC9114 |
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Putative Escherichia coli NCTC9114 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,369,596 bp
GenBank #: UGDB00000000 (NZ_UGDB00000000)
REBASE acronym: EcoC9114
Org_num: 43850
All begin NCTC9114_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4668 | Protein of uncharacterised function, DUF600 | |||
| 4669 | R | Ecos641ORF2625P (100% identity) | GGANNNNNNCTTC | EcoC9114IP |
| 4670 | M | M.Ecos641ORF2625P (100% identity) | GGANNNNNNCTTC | M.EcoC9114I |
| 4671 | S | S.EcoACN2ORF4349P (100% identity) | GGANNNNNNCTTC | S.EcoC9114I |
| 4672 | Uncharacterized conserved protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 61 | plasmid segregation protein | |||
| 62 | M | M.Sen527ORF25750P (100% identity) | M.EcoC9114ORF62P | |
| 63 | cytoplasmic protein | |||
| 260 | cytoplasmic protein | |||
| ??? | M | M.EcoN04AORF145P (100% identity) | SAY | M.EcoC9114ORF261P |
| 262 | YfdA | |||
| 731 | DamX protein | |||
| 732 | M | M.EcoSCU316DamP (100% identity) | GATC | M.EcoC9114DamP |
| 733 | ribulose-phosphate 3-epimerase | |||
| 836 | membrane protein | |||
| 837 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.EcoC9114ORF837P |
| 838 | DNA-binding protein Fis | |||
| 2239 | phosphohydrolase | |||
| 2240 | M | M.Eco11118DcmP (100% identity) | CCWGG | M.EcoC9114DcmP |
| 2241 | V | V.SsoSE61DcmP (100% identity) | V.EcoC9114DcmP | |
| 2242 | DMT superfamily transporter inner | |||
| 3056 | phage protein | |||
| 3062 | M | M.SsoCS14ORF10750P (100% identity) | A | M.EcoC9114ORF3062P |
| 3063 | lipoprotein | |||
| 3702 | protein ninx | |||
| 3703 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoC9114ORF3703P |
| 3704 | recombination protein ninB from phage origin | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 398 | DNA-directed RNA polymerase, beta subunit/140 kD | |||
| 399 | R | Kpn0718McrBP (100% identity) | EcoC9114McrBP | |
| 400 | R | EcoSF10McrCP (100% identity) | EcoC9114McrCP | |
| 402 | Sucrose operon repressor | |||