Escherichia coli NCTC9071 |
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Putative Escherichia coli NCTC9071 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,062,065 bp
GenBank #: UGFU00000000 (NZ_UGFU00000000)
REBASE acronym: Eco9071
Org_num: 43825
All begin NCTC9071_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3968 | methylated adenine and cytosine restriction | |||
| 3969 | R | Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | Eco9071IP |
| 3970 | M | M.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | M.Eco9071I |
| 3971 | S | S.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | S.Eco9071I |
| 3973 | DEAD-box helicase-like protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4865 | recombination associated protein | |||
| 4866 | M | M.Eco5283ORF25950P (100% identity) | M.Eco9071ORF4866P | |
| 4869 | tellurite resistance protein TerB | |||
| 109 | transposase, ORF A, IS3 family, IS407 group | |||
| ??? | M | M.EcoW05E18ORF605P (100% identity) | M.Eco9071ORF110P | |
| 111 | R | SflFF80ORF21000P (100% identity) | YGGCCR | Eco9071ORF110P |
| 112 | HNH nuclease | |||
| 397 | DamX protein | |||
| 398 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9071DamP |
| 399 | ribulose-phosphate 3-epimerase | |||
| 525 | membrane protein | |||
| 526 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco9071ORF526P |
| 527 | DNA-binding protein Fis | |||
| 1463 | recombination protein ninB from phage origin | |||
| 1464 | M | M.EcoLR50ORF16310P (100% identity) | GATC | M.Eco9071ORF1464P |
| 1465 | protein ninX | |||
| 1926 | phosphohydrolase | |||
| 1927 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco9071DcmP |
| 1928 | V | V.SflFF59DcmP (100% identity) | V.Eco9071DcmP | |
| 1929 | DMT superfamily transporter inner | |||
| 2326 | IS600 orfAB transposase | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco9071ORF2327P | |
| 2328 | membrane protein | |||
| 3049 | replication protein for prophage | |||
| 3050 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco9071ORF3050P |
| 3051 | TraR/DksA family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3967 | GTP-binding protein YjiA | |||
| 3968 | R | Ssp28760MrrP (100% identity) | Eco9071MrrP | |
| 3969 | type I restriction enzyme EcoKI subunit R | |||