Escherichia coli NCTC9062 |
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Putative Escherichia coli NCTC9062 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,547,381 bp
GenBank #: UGBV00000000 (NZ_UGBV00000000)
REBASE acronym: Eco9062
Org_num: 43819
All begin NCTC9062_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1627 | IS5 transposase and trans-activator | |||
| 1628 | S | S.EcoAWORFEP (100% identity) | S.Eco9062ORF1629P | |
| 1629 | M | M.EcoW12E19ORF23680P (100% identity) | M.Eco9062ORF1629P | |
| 1630 | R | EcoW12E19ORF23680P (100% identity) | Eco9062ORF1629P | |
| 1631 | Uncharacterised protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5599 | Protein of uncharacterised function (DUF1281) | |||
| ??? | M | M.Sso866ORF27155P (100% identity) | M.Eco9062ORF5600P | |
| 5602 | cytoplasmic protein | |||
| 5690 | YfdA | |||
| 5691 | M | M.Sso866ORF27155P (100% identity) | M.Eco9062ORF5691P | |
| 5692 | cytoplasmic protein | |||
| 5526 | ISShdy1, transposase | |||
| 5527 | M | M.EcoN04AORF145P (99% identity) | M.Eco9062ORF5527P | |
| 5528 | cytoplasmic protein | |||
| 1016 | LexA repressor | |||
| 1017 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco9062ORF1017P |
| 1018 | CPS-53 (KpLE1) prophage protein | |||
| 1125 | DMT superfamily transporter inner | |||
| 1126 | V | V.SsoSE61DcmP (100% identity) | V.Eco9062DcmP | |
| 1127 | M | M.Ecou021DcmP (100% identity) | CCWGG | M.Eco9062DcmP |
| 1128 | phosphohydrolase | |||
| 1346 | YjhS | |||
| 1351 | M | M.SflFF12ORF4115P (100% identity) | M.Eco9062ORF1351P | |
| 1352 | lipoprotein | |||
| 1356 | Crossover junction | |||
| 1357 | M | M.Sfl9783ORF197P (99% identity) | GATC | M.Eco9062ORF1357P |
| 1358 | CPS-53 (KpLE1) prophage protein | |||
| 1918 | replication protein for prophage | |||
| 1919 | M | M.EcoJL05ORF19085P (99% identity) | GATC | M.Eco9062ORF1919P |
| 1920 | TraR/DksA family transcriptional regulator | |||
| 2644 | DNA-binding protein Fis | |||
| 2645 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco9062ORF2645P |
| 2646 | membrane protein | |||
| 2775 | ribulose-phosphate 3-epimerase | |||
| 2776 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9062DamP |
| 2777 | DamX protein | |||
| 3337 | replication gene A protein from bacteriophage | |||
| 3338 | M | M.Kpn323ORF26320P (100% identity) | M.Eco9062ORF3338P | |
| 3339 | Uncharacterised protein | |||
| 5357 | lipoprotein | |||
| 5358 | M | M.EcoEC0636ORF17815P (100% identity) | A | M.Eco9062ORF5358P |
| 5363 | anti-adapter protein IraM | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3923 | Insertion element protein | |||
| 3924 | R | Ssp28760MrrP (100% identity) | Eco9062MrrP | |
| 3925 | GTP-binding protein YjiA | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3334 | Uncharacterised protein | |||
| 3335 | M | M.KpnKp241ORF4555P (100% identity) | M.Eco9062ORF3335P | |
| 3336 | Uncharacterised protein | |||