Escherichia coli NCTC9052 |
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Putative Escherichia coli NCTC9052 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 4,912,431 bp
GenBank #: UGEQ00000000 (NZ_UGEQ00000000)
REBASE acronym: Eco9052
Org_num: 43813
All begin NCTC9052_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1998 | IS1 transposase | |||
| 1999 | R | EhoEh60ORF13695P (92% identity) | Eco9052ORF1999P | |
| 2000 | type I restriction enzyme HsdR protein | |||
| 2994 | ybl103 | |||
| 2995 | M | M.EcosB2CORFEP (100% identity) | GAGNNNNNGTTY | M.Eco9052I |
| 2996 | S | S.EcoSW4848ORF14630P (96% identity) | GAGNNNNNGTTY | S.Eco9052I |
| 2997 | Uncharacterised protein | |||
| 2998 | RNase III inhibitor | |||
| 2999 | R | EcoSW4848ORF14630P (99% identity) | GAGNNNNNGTTY | Eco9052IP |
| 3000 | hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5050 | cytoplasmic protein | |||
| 5051 | M | M.Sso128ORF27515P (99% identity) | SAY | M.Eco9052ORF5051P |
| 5052 | YfdA | |||
| 348 | DamX protein | |||
| 349 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9052Dam |
| 350 | ribulose-phosphate 3-epimerase | |||
| 480 | membrane protein | |||
| ??? | M | M.EcoPEC0009ORF5520P (96% identity) | ATGCAT | M.Eco9052ORF481P |
| 483 | tRNA-dihydrouridine synthase B | |||
| 1931 | phosphohydrolase | |||
| 1932 | M | M.Ecostr9DcmP (100% identity) | CCWGG | M.Eco9052Dcm |
| 1933 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.Eco9052DcmP |
| 1934 | DMT superfamily transporter inner | |||
| 2365 | exonuclease from phage origin | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco9052ORF2366P | |
| 2367 | membrane protein | |||
| 2714 | phage protein | |||
| 2720 | M | M.Eco374ORF14060P (88% identity) | M.Eco9052ORF2720P | |
| 2721 | lipoprotein | |||
| 4359 | methylthioribose kinase | |||
| 4360 | M | M.EcosB7ADndBP (100% identity) | M.Eco9052DndBP | |
| 4361 | PUA domain (predicted RNA-binding domain) | |||
| 4360 | DNA thiolation protein; phage protein | |||
| ??? | M | M.Kpn9968DndCP (99% identity) | M.Eco9052DndCP | |
| 4362 | ATPase involved in DNA thiolation | |||
| 4361 | PUA domain (predicted RNA-binding domain) | |||
| ??? | M | M.EluJP9DndDP (99% identity) | M.Eco9052DndDP | |
| 4364 | DNA thiolation protein; phage protein | |||
| 4366 | restriction endonuclease | |||
| 4367 | R | Kox71DptHP (98% identity) | Eco9052DptHP | |
| 4368 | DNA phosphorothioation-dependent restriction | |||
| 4368 | R | SenK1655DptGP (100% identity) | Eco9052DptGP | |
| 4369 | DNA phosphorothioation-dependent restriction | |||
| 4368 | DNA phosphorothioation-dependent restriction | |||
| 4369 | R | CkoK616DptFP (99% identity) | Eco9052DptFP | |
| 4370 | integrase | |||