Escherichia coli NCTC9048 |
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Putative Escherichia coli NCTC9048 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,421,994 bp
GenBank #: UGFF00000000 (NZ_UGFF00000000)
REBASE acronym: Eco9048
Org_num: 43810
All begin NCTC9048_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5579 | cytoplasmic protein | |||
| 5580 | M | M.EcoV04ORF25795P (100% identity) | SAY | M.Eco9048ORF5580P |
| 5581 | YfdA | |||
| 431 | DamX protein | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco9048DamP |
| 433 | ribulose-phosphate 3-epimerase | |||
| 560 | membrane protein | |||
| 561 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco9048ORF561P |
| 562 | DNA-binding protein Fis | |||
| 1052 | single stranded DNA-binding protein | |||
| 1053 | M | M.Spn7978ORF473P (100% identity) | M.Eco9048ORF1053P | |
| 1054 | R | Spn7978ORF473P (100% identity) | Eco9048ORF1053P | |
| 1055 | Uncharacterised protein | |||
| 2119 | phosphohydrolase | |||
| 2120 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco9048DcmP |
| 2121 | V | V.SsoSE61DcmP (100% identity) | V.Eco9048DcmP | |
| 2122 | DMT superfamily transporter inner | |||
| 2679 | prophage protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco9048ORF2680P | |
| 2681 | membrane protein | |||
| 3036 | TraR/DksA family transcriptional regulator | |||
| 3037 | M | M.KpnK41ORF17960P (99% identity) | GATC | M.Eco9048ORF3037P |
| 3038 | replication protein for prophage | |||
| 3567 | lipoprotein | |||
| 3568 | M | M.EcoSTEC032ORF10825P (100% identity) | M.Eco9048ORF3568P | |
| 3571 | TolA protein (fragment) of prophage | |||
| 4766 | Propionate catabolism operon regulatory protein | |||
| 4767 | R | EcoSCU125ORF12165P (100% identity) | Eco9048ORF4767P | |
| 4768 | transposase subunit | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5551 | Uncharacterised protein | |||
| 5552 | R | EcoC0186ORF25185P (100% identity) | Eco9048ORF5553P | |
| 5553 | M | M.EcoC0186ORF25185P (100% identity) | M.Eco9048ORF5553P | |
| 5554 | plasmid conjugation system NikB | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3162 | Uncharacterised protein | |||
| 3163 | M | M.EcoS792ORF20065P (100% identity) | M.Eco9048ORF3163P | |
| 3164 | Uncharacterised protein | |||