Escherichia coli NCTC9007 |
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Putative Escherichia coli NCTC9007 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,394,347 bp
GenBank #: UGBC00000000 (NZ_UGBC00000000)
REBASE acronym: Eco9007
Org_num: 43784
All begin NCTC9007_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 697 | Uncharacterized conserved protein | |||
| 698 | R | EcosLF82ORF3455P (100% identity) | CAAYNNNNNNNNTGAG | Eco9007IP |
| 699 | M | M.SspS13ORF3945P (100% identity) | CAAYNNNNNNNNTGAG | M.Eco9007I |
| 700 | S | S.EcoSP5ORF2185P (100% identity) | CAAYNNNNNNNNTGAG | S.Eco9007I |
| 702 | Uncharacterized conserved protein | |||
| 740 | Uncharacterised protein | |||
| 741 | M | M.EcoSP5ORF1945P (100% identity) | M.Eco9007ORF741P | |
| 742 | S | S.EcoSP5ORF1945P (100% identity) | S.Eco9007ORF741P | |
| 743 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1433 | Uncharacterised protein | |||
| 1434 | M | M.PmeBin330ORFAP (100% identity) | M.Eco9007ORF1434P | |
| 1435 | Uncharacterised protein | |||
| 1588 | prophage protein | |||
| 1594 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco9007ORF1594P |
| 1595 | lipoprotein | |||
| 735 | YjhS protein | |||
| 736 | R | EcosB2CORFAP (100% identity) | Eco9007ORF736P | |
| 737 | endonuclease | |||
| 2944 | DMT superfamily transporter inner | |||
| 2945 | V | V.SflC32DcmP (74% identity) | V.Eco9007DcmP | |
| 2946 | M | M.EcoSP5DcmP (100% identity) | CCWGG | M.Eco9007DcmP |
| 2947 | phosphohydrolase | |||
| 3741 | 121 aa hypothetical protein | |||
| 3742 | R | Sso8033ORF3755P (99% identity) | Eco9007ORF3743P | |
| ??? | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco9007ORF3743P | |
| 3744 | Uncharacterised protein | |||
| 4490 | DNA-binding protein Fis | |||
| 4491 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.Eco9007ORF4491P |
| 4492 | membrane protein | |||
| 4600 | ribulose-phosphate 3-epimerase | |||
| 4601 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco9007DamP |
| 4602 | DamX protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 700 | Type I restriction enzyme EcoAI specificity | |||
| 702 | R | EcoR41GmrSDP (100% identity) | Eco9007GmrSDP | |
| 703 | transposase YhgA-like protein | |||
| 736 | restriction endonuclease | |||
| ??? | R | EcoSP46McrBP (100% identity) | Eco9007McrBP | |
| 739 | R | EcoSP5McrCP (100% identity) | Eco9007McrCP | |
| 740 | Uncharacterised protein | |||