Escherichia coli NCTC9006 |
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Putative Escherichia coli NCTC9006 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Contig set: 5,251,497 bp
GenBank #: UGBY00000000 (NZ_UGBY00000000)
REBASE acronym: Eco9006
Org_num: 43783
All begin NCTC9006_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3183 | Uncharacterized conserved protein | |||
| 3184 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | Eco9006IP |
| 3185 | M | M.EcoUTI89II (97% identity) | GAGNNNNNNNGTCA | M.Eco9006I |
| 3186 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.Eco9006I |
| 3188 | Uncharacterized conserved protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5042 | recombination associated protein | |||
| 5043 | M | M.Eco1706ORF24875P (99% identity) | M.Eco9006ORF5043P | |
| 5047 | Uncharacterised protein | |||
| 146 | DMT superfamily transporter inner | |||
| 147 | V | V.EcosC25DcmP (100% identity) | V.Eco9006DcmP | |
| 148 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco9006DcmP |
| 149 | phosphohydrolase | |||
| 2782 | phage protein | |||
| 2783 | M | M.EcoR65ORF6360P (100% identity) | M.Eco9006ORF2783P | |
| 2784 | ybl17 | |||
| 1713 | DNA-binding protein Fis | |||
| 1714 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco9006ORF1714P |
| 1715 | membrane protein | |||
| 1835 | ribulose-phosphate 3-epimerase | |||
| 1836 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco9006DamP |
| 1837 | DamX protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3229 | Uncharacterised protein | |||
| 3230 | M | M.EcoUTI89I (100% identity) | CACAG | M.Eco9006II |
| 3231 | R | EcoUTI89IP (100% identity) | CACAG | Eco9006IIP |
| 3232 | phage integrase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3186 | type I restriction-modification system subunit | |||
| 3188 | R | EcoUTI89GmrSDP (97% identity) | Eco9006GmrSDP | |
| 3189 | transposase YhgA-like protein | |||